RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CCDC91Q7Z6B0 441 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 CNPY4Q8N129 248 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 D2HGDHQ8N465 521 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 FBXO39Q8N4B4 442 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 ANKRD49Q8WVL7 239 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 SLC22A18Q96BI1 424 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 MAP3K3Q99759 626 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 DERL2Q9GZP9 239 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 ACTR10Q9NZ32 417 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 ADAMTS6Q9UKP5 1117 aa16.38■□□□□ 0.21
SCAF11-206ENST00000474828 TDRKHQ9Y2W6 561 aaKnown RBP16.38■□□□□ 0.21
SCAF11-206ENST00000474828 NVLO15381 856 aaKnown RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 MPOP05164 745 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 ENO2P09104 434 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 GCAP28676 217 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 CSTF2P33240 577 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 RAB10P61026 200 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 VSNL1P62760 191 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 USP10Q14694 798 aaKnown RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 CACHD1Q5VU97 1274 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 IRGCQ6NXR0 463 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 UBE2R2Q712K3 238 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 MYO1HQ8N1T3 1032 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 LMNTD1Q8N9Z9 388 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 SKA2Q8WVK7 121 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 ZNF578Q96N58 590 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 PKP4Q99569 1192 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 DDA1Q9BW61 102 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 SPRY4Q9C004 299 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 PARVBQ9HBI1 364 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 GPAMQ9HCL2 828 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 AKAP7Q9P0M2 348 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-206ENST00000474828 RAB21Q9UL25 225 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 SLC39A10Q9ULF5 831 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 PLAGL1Q9UM63 463 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 PDE10AQ9Y233 779 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 ADAMTS20P59510 1910 aa16.37■□□□□ 0.21
SCAF11-206ENST00000474828 C1QTNF9BB2RNN3 333 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 E7ENX8 843 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 BRINP1O60477 761 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 ZBTB11O95625 1053 aaPredicted RBP16.36■□□□□ 0.21
SCAF11-206ENST00000474828 SLC16A8O95907 504 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 C1QTNF9P0C862 333 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 SLC35E2BP0CK96 405 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 CCL4P13236 92 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 UGT2B7P16662 529 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 STMN1P16949 149 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 CNTFP26441 200 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 CRABP2P29373 138 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 ETV5P41161 510 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 SERPINB9P50453 376 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 AP1S2P56377 157 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 TAP2Q03519 686 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 ZNF460Q14592 562 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 C3orf38Q5JPI3 329 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 ARMC6Q6NXE6 501 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 FAM92BQ6ZTR7 304 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 GSPT2Q8IYD1 628 aaKnown RBP16.36■□□□□ 0.21
SCAF11-206ENST00000474828 OR2A1Q8NGT9 310 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 AENQ8WTP8 325 aaKnown RBP16.36■□□□□ 0.21
SCAF11-206ENST00000474828 ZNF480Q8WV37 535 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 CCDC138Q96M89 665 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 IL17FQ96PD4 163 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 TRAPPC9Q96Q05 1148 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 PAFAH2Q99487 392 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 CAB39LQ9H9S4 337 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 OCIAD1Q9NX40 245 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 LNPEPQ9UIQ6 1025 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 IKZF3Q9UKT9 509 aa16.36■□□□□ 0.21
SCAF11-206ENST00000474828 CCDC189A1A4V9 331 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 KRT87PA6NCN2 255 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 C9orf172C9J069 976 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-206ENST00000474828 ALDOAP04075 364 aaKnown RBP16.35■□□□□ 0.21
SCAF11-206ENST00000474828 TUBBP07437 444 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 CYP2A7P20853 494 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 IMPA1P29218 277 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 RAB15P59190 212 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 HSD11B2P80365 405 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 CDKL1Q00532 357 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 SLC29A2Q14542 456 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 IL11RAQ14626 422 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 RASA2Q15283 850 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 PHKG1Q16816 387 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 KIF26BQ2KJY2 2108 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 ERCC6LQ2NKX8 1250 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 ZXDCQ2QGD7 858 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-206ENST00000474828 TBC1D25Q3MII6 688 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 ADGRD1Q6QNK2 874 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 BPHLQ86WA6 291 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-206ENST00000474828 RAB42Q8N4Z0 105 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 SNIP1Q8TAD8 396 aaKnown RBP16.35■□□□□ 0.21
SCAF11-206ENST00000474828 MCOLN3Q8TDD5 553 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 PPM1MQ96MI6 270 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 TAAR9Q96RI9 348 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 USP24Q9UPU5 2620 aa16.35■□□□□ 0.21
SCAF11-206ENST00000474828 A0A0J9YY10 115 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 ZNF839A8K0R7 811 aa16.34■□□□□ 0.21
SCAF11-206ENST00000474828 A8MU76 341 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms