RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 STARD5Q9NSY2 213 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 C20orf96Q9NUD7 363 aaPredicted RBP10.79□□□□□ -0.68
CKS1B-206ENST00000474215 GALPQ9UBC7 116 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 TUBD1Q9UJT1 453 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 PYCARDQ9ULZ3 195 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 FARSAQ9Y285 508 aaKnown RBP10.79□□□□□ -0.68
CKS1B-206ENST00000474215 NFS1Q9Y697 457 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 SAR1BQ9Y6B6 198 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 FAM169AQ9Y6X4 670 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 PIKFYVEQ9Y2I7 2098 aa10.79□□□□□ -0.68
CKS1B-206ENST00000474215 E5RI56 91 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 E7EQ34 232 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 DNALI1O14645 258 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 ZNF749O43361 778 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 OR2B3O76000 313 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 HBQ1P09105 142 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 FURINP09958 794 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 IVDP26440 423 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 RORAP35398 523 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 NFATC3Q12968 1075 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 CTBP1Q13363 440 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 SF1Q15637 639 aaKnown RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 CCSMST1Q4G0I0 132 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 IZUMO3Q5VZ72 239 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 LCN10Q6JVE6 187 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 CNSTQ6PJW8 725 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 SYDE1Q6ZW31 735 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 DENND6AQ8IWF6 608 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 KLHL7Q8IXQ5 586 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 DNAJC22Q8N4W6 341 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 RAB42Q8N4Z0 105 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 LMNTD1Q8N9Z9 388 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 CALML6Q8TD86 181 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 MAGEC3Q8TD91 643 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 NAPGQ99747 312 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 DPH2Q9BQC3 489 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 SLC7A5P2Q9GIP4 190 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 SPRTNQ9H040 489 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 SLC25A18Q9H1K4 315 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 PCMTD2Q9NV79 361 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 PLCL2Q9UPR0 1127 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 RUVBL2Q9Y230 463 aaKnown RBP10.78□□□□□ -0.68
CKS1B-206ENST00000474215 KCNMB2Q9Y691 235 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 AP1M2Q9Y6Q5 423 aa10.78□□□□□ -0.68
CKS1B-206ENST00000474215 CDC14CA4D256 554 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 H3BMH7 237 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 HCRTR1O43613 425 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 PRICKLE3O43900 615 aaPredicted RBP10.77□□□□□ -0.69
CKS1B-206ENST00000474215 HAUS5O94927 633 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 RAB40ALP0C0E4 278 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 PLA2G2AP14555 144 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 PGAM1P18669 254 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 MAGP20916 626 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 SLC1A2P43004 574 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 PAFAH1B1P43034 410 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 CLCN7P51798 805 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 DR1Q01658 176 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 UGT8Q16880 541 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 TTLL9Q3SXZ7 439 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 HSP90AA5PQ58FG0 334 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 ACSBG2Q5FVE4 666 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 ZNF549Q6P9A3 640 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 SYVN1Q86TM6 617 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 FAM20CQ8IXL6 584 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 SYTL1Q8IYJ3 562 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 HMGCLL1Q8TB92 370 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 DENND1AQ8TEH3 1009 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 RUNDC3BQ96NL0 473 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 EBNA1BP2Q99848 306 aaKnown RBP10.77□□□□□ -0.69
CKS1B-206ENST00000474215 FAM167BQ9BTA0 163 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 NAT9Q9BTE0 207 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 NLNQ9BYT8 704 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 CCDC68Q9H2F9 335 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.69
CKS1B-206ENST00000474215 INTS7Q9NVH2 962 aaKnown RBP10.77□□□□□ -0.69
CKS1B-206ENST00000474215 KLHL42Q9P2K6 505 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 RNF14Q9UBS8 474 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 TSR3Q9UJK0 312 aaKnown RBP10.77□□□□□ -0.69
CKS1B-206ENST00000474215 FBXO5Q9UKT4 447 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 POLHQ9Y253 713 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 KLHL20Q9Y2M5 609 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 COMMD10Q9Y6G5 202 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 FASNP49327 2511 aaKnown RBP10.77□□□□□ -0.69
CKS1B-206ENST00000474215 ZNF462Q96JM2 2506 aa10.77□□□□□ -0.69
CKS1B-206ENST00000474215 TARM1B6A8C7 271 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 CCDC188H7C350 402 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 SMAPO00193 183 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 PSIP1O75475 530 aaKnown RBP10.76□□□□□ -0.69
CKS1B-206ENST00000474215 FKBP9O95302 570 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 TTC4O95801 387 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 CAPN1P07384 714 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 CTSBP07858 339 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 F7P08709 466 aaPredicted RBP10.76□□□□□ -0.69
CKS1B-206ENST00000474215 AGXTP21549 392 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 BDKRB1P46663 353 aa10.76□□□□□ -0.69
CKS1B-206ENST00000474215 RPS18P62269 152 aaKnown RBP10.76□□□□□ -0.69
CKS1B-206ENST00000474215 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
CKS1B-206ENST00000474215 CRYMQ14894 314 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms