RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SIGIRRQ6IA17 410 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CWC27Q6UX04 472 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PLXDC2Q6UX71 529 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 LDHAL6AQ6ZMR3 332 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 KIF6Q6ZMV9 814 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 RUFY3Q7L099 469 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CACNA2D4Q7Z3S7 1137 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CNTROBQ8N137 903 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PLD5Q8N7P1 536 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 USP38Q8NB14 1042 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 C11orf65Q8NCR3 313 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 ACVR1CQ8NER5 493 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TNIP2Q8NFZ5 429 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TRAPPC12Q8WVT3 735 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CCT6BQ92526 530 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 GRAMD2BQ96HH9 432 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TCEANC2Q96MN5 208 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 COG8Q96MW5 612 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 ZIM3Q96PE6 472 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 HEMGNQ9BXL5 484 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 IFIH1Q9BYX4 1025 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TRPC7Q9HCX4 862 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PIH1D3Q9NQM4 214 aaKnown RBP1.51□□□□□ -2.17
CCDC39-203ENST00000473854 RASSF1Q9NS23 344 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 DIAPH3Q9NSV4 1193 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PAG1Q9NWQ8 432 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 FLRT3Q9NZU0 649 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 CHMP5Q9NZZ3 219 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 SLC6A5Q9Y345 797 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 KIF25-AS1Q9Y6Z4 181 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 TRPM7Q96QT4 1865 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PLXNB2O15031 1838 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 PDE4DIPQ5VU43 2346 aa1.51□□□□□ -2.17
CCDC39-203ENST00000473854 BPTFQ12830 3046 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 DNAH14Q0VDD8 3507 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 NID2Q14112 1375 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 FRMPD3Q5JV73 1810 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 NEDD4P46934 1319 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 SALL1Q9NSC2 1324 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 hCG_1642624A0A1W2PR95 340 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 FSD2A1L4K1 749 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 SRRM4A7MD48 611 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 ERVV-1B6SEH8 477 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 GPAA1O43292 621 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 SEC14L5O43304 696 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 EPB41L2O43491 1005 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TSPAN3O60637 253 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 JAK2O60674 1132 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TOM1O60784 492 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CDC123O75794 336 aaPredicted RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 REC8O95072 547 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CTDNEP1O95476 244 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 C22orf31O95567 290 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 STARD3NLO95772 234 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 FTCDO95954 541 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TFAP2AP05549 437 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 URODP06132 367 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CNPP09543 421 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 IFIT1P09914 478 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 IRF1P10914 325 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CASTP20810 708 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TIMM10P62072 90 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 EFNB1P98172 346 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TDGQ13569 410 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 ZNF766Q5HY98 468 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 WDR45BQ5MNZ6 344 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 ZNF280DQ6N043 979 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TMEM81Q6P7N7 255 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 FASTKD5Q7L8L6 764 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 C2CD5Q86YS7 1000 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TBC1D10CQ8IV04 446 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC83Q8IWF9 413 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 ZBED8Q8IZ13 594 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 BEST3Q8N1M1 668 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 NECAB1Q8N987 351 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 ANKRD42Q8N9B4 389 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 PPP4R1Q8TF05 950 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 SUSD6Q92537 303 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 GTF3C6Q969F1 213 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TOMM40LQ969M1 308 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 RHBDF1Q96CC6 855 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 EVI5LQ96CN4 794 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 SLC41A2Q96JW4 573 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 JAKMIP1Q96N16 626 aaKnown RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 FAM110AQ9BQ89 295 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CHMP4AQ9BY43 222 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 LRRC2Q9BYS8 371 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 PANK2Q9BZ23 570 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 SEBOXQ9HB31 216 aaPredicted RBP1.5□□□□□ -2.17
CCDC39-203ENST00000473854 C20orf141Q9NUB4 165 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 RNF186Q9NXI6 227 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 CHD7Q9P2D1 2997 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 PADI3Q9ULW8 664 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 MTMR6Q9Y217 621 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 GPR52Q9Y2T5 361 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 WDR87Q6ZQQ6 2873 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 UNC80Q8N2C7 3258 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 RALGAPA2Q2PPJ7 1873 aa1.5□□□□□ -2.17
CCDC39-203ENST00000473854 TRANK1O15050 2925 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms