RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 STX16O14662 325 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CFLARO15519 480 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ZBTB14O43829 449 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TBC1D4O60343 1298 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 USP2O75604 605 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 IGKV5-2P06315 115 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 AKR1B1P15121 316 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CRHR1P34998 444 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ADD2P35612 726 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GGT5P36269 586 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC1A6P48664 564 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 MAP2K6P52564 334 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PER3P56645 1201 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CCNA1P78396 465 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SMAD3P84022 425 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 IRF9Q00978 393 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NCF4Q15080 339 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SMAD2Q15796 467 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 KIF19Q2TAC6 998 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TMEM236Q5W0B7 351 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FUT10Q6P4F1 479 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 USP45Q70EL2 814 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 LUZP2Q86TE4 346 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC26A11Q86WA9 606 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 WFDC3Q8IUB2 231 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ZSCAN18Q8TBC5 510 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF564Q8TBZ8 553 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 DEPDC1BQ8WUY9 529 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PTERQ96BW5 349 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FYTTD1Q96QD9 318 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NPAS1Q99742 590 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 HDHD5Q9BXW7 423 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 C20orf27Q9GZN8 174 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ING2Q9H160 280 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GSN-AS1Q9NRJ2 163 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 BFARQ9NZS9 450 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 COL20A1Q9P218 1284 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TRPS1Q9UHF7 1281 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PACSIN3Q9UKS6 424 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TRAPPC4Q9Y296 219 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CDY1Q9Y6F8 540 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM205AQ6ZU69 1335 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 METTL15A6NJ78 407 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PSMD9O00233 223 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF195O14628 629 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PDE9AO76083 593 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ABLIM3O94929 683 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 EPOP01588 193 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ALPPP05187 535 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 HEXBP07686 556 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FASP25445 335 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SSTR1P30872 391 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ACSL1P33121 698 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NUP62P37198 522 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FNTBP49356 437 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CCT3P49368 545 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RAB25P57735 213 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 C21orf58P58505 322 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 C1QTNF8P60827 252 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 MRPS5P82675 430 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TRAF3Q13114 568 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FADDQ13158 208 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 GRAPQ13588 217 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 LRRC26Q2I0M4 334 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 AAK1Q2M2I8 961 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 KRT39Q6A163 491 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 EPGNQ6UW88 154 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TEX261Q6UWH6 196 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CHST15Q7LFX5 561 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 OVCH2Q7RTZ1 564 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 MAVSQ7Z434 540 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PTAR1Q7Z6K3 402 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 EPHX4Q8IUS5 362 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ADGRG2Q8IZP9 1017 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 OFCC1Q8IZS5 231 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TMEM151AQ8N4L1 468 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 PARP16Q8N5Y8 322 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 DNAAF3Q8N9W5 541 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ZMIZ2Q8NF64 920 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FBXO30Q8TB52 745 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RIT1Q92963 219 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 RCN3Q96D15 328 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FUBP3Q96I24 572 aaKnown RBP eCLIP5.02□□□□□ -1.619e-7■□□□□ 9.9
TMEM39A-206ENST00000473684 UBXN10Q96LJ8 280 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 HYLS1Q96M11 299 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 ELF4Q99607 663 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM118BQ9BPY3 351 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 NXF2Q9GZY0 626 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 LRRC4Q9HBW1 653 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 BIN3Q9NQY0 253 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 AGPAT4Q9NRZ5 378 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 CCM2LQ9NUG4 571 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 BLOC1S4Q9NUP1 217 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TAS2R14Q9NYV8 317 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 TMEM181Q9P2C4 612 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 OPTCQ9UBM4 332 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC23A1Q9UHI7 598 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 AJAP1Q9UKB5 411 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SCML1Q9UN30 329 aa5.02□□□□□ -1.61
TMEM39A-206ENST00000473684 SRPK3Q9UPE1 567 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms