RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 USP24Q9UPU5 2620 aa8.84□□□□□ -1
SYN3-211ENST00000472027 CEP295Q9C0D2 2601 aa8.83□□□□□ -1
SYN3-211ENST00000472027 KRT87PA6NCN2 255 aa8.83□□□□□ -1
SYN3-211ENST00000472027 TMEM150CB9EJG8 249 aa8.83□□□□□ -1
SYN3-211ENST00000472027 ERVH48-1M5A8F1 160 aa8.83□□□□□ -1
SYN3-211ENST00000472027 PRICKLE3O43900 615 aaPredicted RBP8.83□□□□□ -1
SYN3-211ENST00000472027 VPS26AO75436 327 aa8.83□□□□□ -1
SYN3-211ENST00000472027 PSIP1O75475 530 aaKnown RBP8.83□□□□□ -1
SYN3-211ENST00000472027 SCRG1O75711 98 aa8.83□□□□□ -1
SYN3-211ENST00000472027 MPC1LP0DKB6 136 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CBSLP0DN79 551 aa8.83□□□□□ -1
SYN3-211ENST00000472027 F8A1P23610 371 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CBSP35520 551 aa8.83□□□□□ -1
SYN3-211ENST00000472027 DLSTP36957 453 aa8.83□□□□□ -1
SYN3-211ENST00000472027 STAT5AP42229 794 aa8.83□□□□□ -1
SYN3-211ENST00000472027 TIAL1Q01085 375 aaKnown RBP eCLIP8.83□□□□□ -1
SYN3-211ENST00000472027 CUL1Q13616 776 aa8.83□□□□□ -1
SYN3-211ENST00000472027 FRG1Q14331 258 aaKnown RBP8.83□□□□□ -1
SYN3-211ENST00000472027 FASTKD3Q14CZ7 662 aaKnown RBP8.83□□□□□ -1
SYN3-211ENST00000472027 SF1Q15637 639 aaKnown RBP8.83□□□□□ -1
SYN3-211ENST00000472027 PRAMEF17Q5VTA0 474 aa8.83□□□□□ -1
SYN3-211ENST00000472027 UGT3A1Q6NUS8 523 aa8.83□□□□□ -1
SYN3-211ENST00000472027 PCSK4Q6UW60 755 aa8.83□□□□□ -1
SYN3-211ENST00000472027 KIAA0408Q6ZU52 694 aa8.83□□□□□ -1
SYN3-211ENST00000472027 GALNT7Q86SF2 657 aa8.83□□□□□ -1
SYN3-211ENST00000472027 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
SYN3-211ENST00000472027 TMEM126BQ8IUX1 230 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CPNE9Q8IYJ1 553 aa8.83□□□□□ -1
SYN3-211ENST00000472027 ZBED8Q8IZ13 594 aa8.83□□□□□ -1
SYN3-211ENST00000472027 C19orf47Q8N9M1 422 aaKnown RBP8.83□□□□□ -1
SYN3-211ENST00000472027 SLC38A9Q8NBW4 561 aa8.83□□□□□ -1
SYN3-211ENST00000472027 OR9A1PQ8NGU1 263 aa8.83□□□□□ -1
SYN3-211ENST00000472027 OR1L3Q8NH93 324 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CD200R1Q8TD46 325 aa8.83□□□□□ -1
SYN3-211ENST00000472027 DENND1AQ8TEH3 1009 aa8.83□□□□□ -1
SYN3-211ENST00000472027 ZNF592Q92610 1267 aa8.83□□□□□ -1
SYN3-211ENST00000472027 TTC9Q92623 222 aa8.83□□□□□ -1
SYN3-211ENST00000472027 KIAA1143Q96AT1 154 aaPredicted RBP8.83□□□□□ -1
SYN3-211ENST00000472027 SLC45A3Q96JT2 553 aa8.83□□□□□ -1
SYN3-211ENST00000472027 NDNQ99608 321 aa8.83□□□□□ -1
SYN3-211ENST00000472027 RAB11FIP5Q9BXF6 653 aa8.83□□□□□ -1
SYN3-211ENST00000472027 SLC12A9Q9BXP2 914 aa8.83□□□□□ -1
SYN3-211ENST00000472027 AKIRIN1Q9H9L7 192 aaPredicted RBP8.83□□□□□ -1
SYN3-211ENST00000472027 GPN2Q9H9Y4 310 aaPredicted RBP8.83□□□□□ -1
SYN3-211ENST00000472027 LHX9Q9NQ69 397 aa8.83□□□□□ -1
SYN3-211ENST00000472027 MOCS1Q9NZB8 636 aa8.83□□□□□ -1
SYN3-211ENST00000472027 GRHL1Q9NZI5 618 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.83□□□□□ -1
SYN3-211ENST00000472027 SLC17A6Q9P2U8 582 aa8.83□□□□□ -1
SYN3-211ENST00000472027 IL17BQ9UHF5 180 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CROTQ9UKG9 612 aa8.83□□□□□ -1
SYN3-211ENST00000472027 KLHL20Q9Y2M5 609 aa8.83□□□□□ -1
SYN3-211ENST00000472027 IGF2RP11717 2491 aa8.83□□□□□ -1
SYN3-211ENST00000472027 APC2O95996 2303 aa8.83□□□□□ -1
SYN3-211ENST00000472027 CACNA1BQ00975 2339 aa8.83□□□□□ -1
SYN3-211ENST00000472027 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
SYN3-211ENST00000472027 SDK2Q58EX2 2172 aa8.82□□□□□ -1
SYN3-211ENST00000472027 ARHGEF33A8MVX0 844 aa8.82□□□□□ -1
SYN3-211ENST00000472027 E7EQ34 232 aa8.82□□□□□ -1
SYN3-211ENST00000472027 GFYI3L273 518 aa8.82□□□□□ -1
SYN3-211ENST00000472027 ATXN7O15265 892 aaPredicted RBP8.82□□□□□ -1
SYN3-211ENST00000472027 EIF3HO15372 352 aaKnown RBP eCLIP8.82□□□□□ -1
SYN3-211ENST00000472027 NKX2-8O15522 239 aa8.82□□□□□ -1
SYN3-211ENST00000472027 HCRTR1O43613 425 aa8.82□□□□□ -1
SYN3-211ENST00000472027 ZBTB14O43829 449 aa8.82□□□□□ -1
SYN3-211ENST00000472027 CPNE3O75131 537 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 CATP04040 527 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
SYN3-211ENST00000472027 ENO3P13929 434 aaPredicted RBP8.82□□□□□ -1
SYN3-211ENST00000472027 TCN2P20062 427 aa8.82□□□□□ -1
SYN3-211ENST00000472027 MCM3P25205 808 aa8.82□□□□□ -1
SYN3-211ENST00000472027 OAS2P29728 719 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 SKIV2L2P42285 1042 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 GABRA4P48169 554 aa8.82□□□□□ -1
SYN3-211ENST00000472027 CDKN2DP55273 166 aa8.82□□□□□ -1
SYN3-211ENST00000472027 CKAP4Q07065 602 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 MGAT5Q09328 741 aa8.82□□□□□ -1
SYN3-211ENST00000472027 FASTKQ14296 549 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 TRADDQ15628 312 aa8.82□□□□□ -1
SYN3-211ENST00000472027 CYP2A13Q16696 494 aa8.82□□□□□ -1
SYN3-211ENST00000472027 TAF1BQ53T94 588 aaPredicted RBP8.82□□□□□ -1
SYN3-211ENST00000472027 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 RBM20Q5T481 1227 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 HECTD2Q5U5R9 776 aa8.82□□□□□ -1
SYN3-211ENST00000472027 FAM199XQ6PEV8 388 aaPredicted RBP8.82□□□□□ -1
SYN3-211ENST00000472027 PAQR3Q6TCH7 311 aa8.82□□□□□ -1
SYN3-211ENST00000472027 PALM2Q8IXS6 379 aa8.82□□□□□ -1
SYN3-211ENST00000472027 DNAJC22Q8N4W6 341 aa8.82□□□□□ -1
SYN3-211ENST00000472027 LSM14AQ8ND56 463 aaKnown RBP8.82□□□□□ -1
SYN3-211ENST00000472027 OR2A1Q8NGT9 310 aa8.82□□□□□ -1
SYN3-211ENST00000472027 HMGCLL1Q8TB92 370 aa8.82□□□□□ -1
SYN3-211ENST00000472027 PYROXD1Q8WU10 500 aa8.82□□□□□ -1
SYN3-211ENST00000472027 EEF1AKMT1Q8WVE0 214 aa8.82□□□□□ -1
SYN3-211ENST00000472027 ASB11Q8WXH4 323 aa8.82□□□□□ -1
SYN3-211ENST00000472027 N4BP2L2Q92802 583 aaPredicted RBP8.82□□□□□ -1
SYN3-211ENST00000472027 ZUFSPQ96AP4 578 aa8.82□□□□□ -1
SYN3-211ENST00000472027 CLIP3Q96DZ5 547 aa8.82□□□□□ -1
SYN3-211ENST00000472027 PKP4Q99569 1192 aa8.82□□□□□ -1
SYN3-211ENST00000472027 LRRC1Q9BTT6 524 aa8.82□□□□□ -1
SYN3-211ENST00000472027 SLC7A5P2Q9GIP4 190 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms