RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 AIMP2Q13155 320 aaKnown RBP3.81□□□□□ -1.8
CD46-213ENST00000471987 TNIP1Q15025 636 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 MTHFSDQ2M296 383 aaKnown RBP3.81□□□□□ -1.8
CD46-213ENST00000471987 PHLDA2Q53GA4 152 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 SLC25A53Q5H9E4 307 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 FIGLAQ6QHK4 219 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 TMEM207Q6UWW9 146 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 TMPRSS11FQ6ZWK6 438 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 RTN4RL2Q86UN3 420 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 C1orf131Q8NDD1 294 aaKnown RBP3.81□□□□□ -1.8
CD46-213ENST00000471987 NPEPL1Q8NDH3 523 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 C17orf47Q8NEP4 570 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 OR13C3Q8NGS6 347 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 MIPOL1Q8TD10 442 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 C10orf90Q96M02 699 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 MIS12Q9H081 205 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 MED20Q9H944 212 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 B3GAT1Q9P2W7 334 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 DAPK2Q9UIK4 370 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 PPP2R2CQ9Y2T4 447 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 ZNF541Q9H0D2 1346 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 J3KRW8 73 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 BCL2L11O43521 198 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 TSPAN1O60635 241 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 CDK2AP2O75956 126 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 SEC24AO95486 1093 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 CDH3P22223 829 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 LHCGRP22888 699 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 ACSL1P33121 698 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 GUCY2DQ02846 1103 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 XKR3Q5GH77 459 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 ELFN2Q5R3F8 820 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 TMED8Q6PL24 325 aaPredicted RBP3.8□□□□□ -1.8
CD46-213ENST00000471987 LDB1Q86U70 411 aaPredicted RBP3.8□□□□□ -1.8
CD46-213ENST00000471987 ADIPOR2Q86V24 386 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 CEP57L1Q8IYX8 460 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
CD46-213ENST00000471987 RAD9AQ99638 391 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 FAM49AQ9H0Q0 323 aaPredicted RBP3.8□□□□□ -1.8
CD46-213ENST00000471987 SMARCAD1Q9H4L7 1026 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 ZNF148Q9UQR1 794 aa3.8□□□□□ -1.8
CD46-213ENST00000471987 ASB14A6NK59 587 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 HPRP00739 348 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 SLC2A2P11168 524 aaPredicted RBP3.79□□□□□ -1.8
CD46-213ENST00000471987 ITIH1P19827 911 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 GABRA5P31644 462 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 TSFMP43897 325 aaKnown RBP3.79□□□□□ -1.8
CD46-213ENST00000471987 ODF4Q2M2E3 257 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 LCN1P1Q5VSP4 162 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 G2E3Q7L622 706 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 NUDT13Q86X67 352 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 AFAP1Q8N556 730 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 OR1L3Q8NH93 324 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 GATAD1Q8WUU5 269 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 SAT2Q96F10 170 aaPredicted RBP3.79□□□□□ -1.8
CD46-213ENST00000471987 SLC45A3Q96JT2 553 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 NECTIN4Q96NY8 510 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 AGAP4Q96P64 663 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 EIF2B3Q9NR50 452 aaKnown RBP3.79□□□□□ -1.8
CD46-213ENST00000471987 SERINC1Q9NRX5 453 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
CD46-213ENST00000471987 NDE1Q9NXR1 346 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 PLAGL1Q9UM63 463 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 TNNQ9UQP3 1299 aa3.79□□□□□ -1.8
CD46-213ENST00000471987 A0A1W2PR80 420 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 F5H0A9 414 aaPredicted RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 OR10H2O60403 315 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 IGKV3-15P01624 115 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 HSPA8P11142 646 aaKnown RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 HLA-FP30511 346 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 MNDAP41218 407 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 GARSP41250 739 aaKnown RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 SLC9A3P48764 834 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 HERC3Q15034 1050 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 HIGD2BQ4VC39 106 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 SPDYCQ5MJ68 293 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 DHRS7BQ6IAN0 325 aaPredicted RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 TBC1D1Q86TI0 1168 aaPredicted RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 ZNF584Q8IVC4 421 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 OR11H4Q8NGC9 324 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 ZPLD1Q8TCW7 415 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 LRRC15Q8TF66 581 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 NKX3-1Q99801 234 aaPredicted RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 GPR83Q9NYM4 423 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 SEC63Q9UGP8 760 aaKnown RBP3.78□□□□□ -1.8
CD46-213ENST00000471987 CSNK1G3Q9Y6M4 447 aa3.78□□□□□ -1.8
CD46-213ENST00000471987 A0A0U1RQG5 324 aaPredicted RBP3.77□□□□□ -1.81
CD46-213ENST00000471987 PI4KAP2A4QPH2 592 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 ANKUB1A6NFN9 424 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 C2orf81A6NN90 581 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 ENO4A6NNW6 628 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 ZWINTO95229 277 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 CD4P01730 458 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 OR2T7P0C7T2 308 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 PIK3R1P27986 724 aa3.77□□□□□ -1.81
CD46-213ENST00000471987 CDC25CP30307 473 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms