RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 HCRTR1O43613 425 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 DFNA5O60443 496 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 LRP3O75074 770 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 WFS1O76024 890 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 IPO13O94829 963 aaKnown RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ZWINTO95229 277 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 GUCA1CO95843 209 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 CHRNGP07510 517 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 SLC35G4P0C7Q5 338 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 VCLP18206 1134 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 BGNP21810 368 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 CD1CP29017 333 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 HPDP32754 393 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 CSF2RBP32927 897 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 GABRA4P48169 554 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ALDH18A1P54886 795 aaKnown RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 AP1S2P56377 157 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ERVPABLB-1P60509 514 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 SH3BP2P78314 561 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 OCRLQ01968 901 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 TRAF3Q13114 568 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ZIC1Q15915 447 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PFKFB4Q16877 469 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 GUSBP11Q6P575 273 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 AGTRAPQ6RW13 159 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 IL27RAQ6UWB1 636 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PRR23CQ6ZRP0 262 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 TMEM26Q6ZUK4 368 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 MAVSQ7Z434 540 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 RABEPKQ7Z6M1 372 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 FAM129CQ86XR2 697 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 FAM20CQ8IXL6 584 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ARL10Q8N8L6 244 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PTGR2Q8N8N7 351 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ANKRD42Q8N9B4 389 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 OR4K1Q8NGD4 311 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 OR2L8Q8NGY9 312 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 RDH11Q8TC12 318 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ZFPM2Q8WW38 1151 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 RSC1A1Q92681 617 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PYCR2Q96C36 320 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PHF21BQ96EK2 531 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 WDR34Q96EX3 536 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 CCDC138Q96M89 665 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 OR2A14Q96R47 310 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 FERD3LQ96RJ6 166 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 HGH1Q9BTY7 390 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 CD244Q9BZW8 370 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ATG10Q9H0Y0 220 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 POT1Q9NUX5 634 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 IMP3Q9NV31 184 aaKnown RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 NUDT4Q9NZJ9 180 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PDP2Q9P2J9 529 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 KLK4Q9Y5K2 254 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 TP53BP1Q12888 1972 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ZFHX2Q9C0A1 2572 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-207ENST00000471342 ASXL3Q9C0F0 2248 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 NCF1BA6NI72 391 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 LILRA5A6NI73 299 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 OR5K4A6NMS3 321 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 NCF1CA8MVU1 366 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 H3BMH7 237 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 NUDT21O43809 227 aaKnown RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 PRAMEF10O60809 474 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 LYPLA1O75608 230 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 KLHL18O94889 574 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 CATP04040 527 aaKnown RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 CTSBP07858 339 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 CTSEP14091 401 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 NCF1P14598 390 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 TSPAN8P19075 237 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 PSMB5P28074 263 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 HSPA7P48741 367 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 CCT8P50990 548 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 PDX1P52945 283 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 PNLIPRP1P54315 467 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 NAGLUP54802 743 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 CDH13P55290 713 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 FOXA1P55317 472 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 HERVK_113P63132 956 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 GUCY1A3Q02108 690 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 ARHGAP19Q14CB8 494 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 PDK4Q16654 411 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SYTL3Q4VX76 610 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SULT1C3Q6IMI6 304 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF425Q6IV72 752 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SUSD1Q6UWL2 747 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SLCO4C1Q6ZQN7 724 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 VN1R5Q7Z5H4 357 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 GKN2Q86XP6 184 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 C2orf73Q8N5S3 287 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 EID2Q8N6I1 236 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 OR52B6Q8NGF0 335 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 MGARPQ8TDB4 240 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF75CPQ92670 426 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 RAD51AP1Q96B01 352 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SKA1Q96BD8 255 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 ERVK-6Q9BXR3 956 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms