RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DDIASQ8IXT1 998 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 RBM15BQ8NDT2 890 aaKnown RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 UTP4Q969X6 686 aaKnown RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 ESAMQ96AP7 390 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 HIC2Q96JB3 615 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 LENG8Q96PV6 779 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 MIPEPQ99797 713 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 RTKNQ9BST9 563 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 GPR34Q9UPC5 381 aa17.04■□□□□ 0.32
HSPG2-208ENST00000471322 COPG1Q9Y678 874 aaKnown RBP17.04■□□□□ 0.32
HSPG2-208ENST00000471322 A0A1B0GTW7 788 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 A0A1B0GVT2 93 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 SLC5A10A0PJK1 596 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 LIN7AO14910 233 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 PIP5K1BO14986 540 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 KATNA1O75449 491 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 MATN4O95460 622 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 PAK4O96013 591 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 ENGP17813 658 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 TEAD1P28347 426 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 PGM1P36871 562 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 HSPA7P48741 367 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 CCNG1P51959 295 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 CYLC2Q14093 348 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 FGL2Q14314 439 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 MAPRE2Q15555 327 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 TMEM198Q66K66 360 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 ADGRG6Q86SQ4 1221 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 TRIM69Q86WT6 500 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 RASGRP3Q8IV61 690 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 PARP9Q8IXQ6 854 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 LINC00615Q96LM1 132 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 FOPNLQ96NB1 174 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 IPPKQ9H8X2 491 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 RIC8BQ9NVN3 520 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 G3BP2Q9UN86 482 aaKnown RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 ASB1Q9Y576 335 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 TRPM6Q9BX84 2022 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 CACNA1EQ15878 2313 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 ADAMTS9Q9P2N4 1935 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 LOC100653049A0A140TA62 436 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 C17orf113A0A1B0GUU1 675 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 C10orf142B7Z368 130 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 H0Y8X5 98 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 CCNT2O60583 730 aaKnown RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 KRT34O76011 436 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 EPB42P16452 691 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 MAP4P27816 1152 aaKnown RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 HOXD12P35452 270 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 AFF3P51826 1226 aaKnown RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 FOXA1P55317 472 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 RPS21P63220 83 aaKnown RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 TMEM259Q4ZIN3 620 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 PNCKQ6P2M8 343 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 SLC23A3Q6PIS1 610 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 LRRC70Q7Z2Q7 622 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 MILR1Q7Z6M3 343 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 VRK3Q8IV63 474 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 BEND7Q8N7W2 519 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-208ENST00000471322 CEP76Q8TAP6 659 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 TMEM79Q9BSE2 394 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 EDEM2Q9BV94 578 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 OR2AG1Q9H205 316 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 SLC32A1Q9H598 525 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 AKTIPQ9H8T0 292 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 CAPN10Q9HC96 672 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 SUSD2Q9UGT4 822 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 SLC6A14Q9UN76 642 aa17.03■□□□□ 0.32
HSPG2-208ENST00000471322 PLXNB3Q9ULL4 1909 aa17.02■□□□□ 0.32
HSPG2-208ENST00000471322 K7ESM1 405 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 OR7A17O14581 309 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 WNT1P04628 370 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 LBPP18428 481 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 CLDN2P57739 230 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 ERVPABLB-1P60509 514 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 STX1BP61266 288 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 C18orf21Q32NC0 220 aaPredicted RBP17.02■□□□□ 0.31
HSPG2-208ENST00000471322 SPATA19Q7Z5L4 167 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 SLC22A15Q8IZD6 547 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 POU5F2Q8N7G0 328 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 METTL6Q8TCB7 284 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 ATL1Q8WXF7 558 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 TUBGCP3Q96CW5 907 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 COX14Q96I36 57 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 C3orf30Q96M34 536 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 KCNA7Q96RP8 456 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 NTMT1Q9BV86 223 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 SLC17A9Q9BYT1 436 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 TUBB1Q9H4B7 451 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 NDE1Q9NXR1 346 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 ZNF225Q9UK10 706 aa17.02■□□□□ 0.31
HSPG2-208ENST00000471322 PSMD12O00232 456 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-208ENST00000471322 PSIP1O75475 530 aaKnown RBP17.01■□□□□ 0.31
HSPG2-208ENST00000471322 OR4F21O95013 312 aa17.01■□□□□ 0.31
HSPG2-208ENST00000471322 CATP04040 527 aaKnown RBP17.01■□□□□ 0.31
HSPG2-208ENST00000471322 EBLN1P0CF75 366 aa17.01■□□□□ 0.31
HSPG2-208ENST00000471322 PRDX3P30048 256 aaKnown RBP17.01■□□□□ 0.31
HSPG2-208ENST00000471322 CPOXP36551 454 aa17.01■□□□□ 0.31
HSPG2-208ENST00000471322 ARL1P40616 181 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-208ENST00000471322 DPP6P42658 865 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms