RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 DRD4P21917 467 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 IMPA1P29218 277 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 SHMT2P34897 504 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 RAB28P51157 221 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ATXN3P54252 364 aaPredicted RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 CDC16Q13042 620 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 KIF19Q2TAC6 998 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 DUS1LQ6P1R4 473 aaKnown RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 IYDQ6PHW0 289 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 SPATA21Q7Z572 469 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 MILR1Q7Z6M3 343 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 THOC6Q86W42 341 aaKnown RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 NRROSQ86YC3 692 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 CLYBLQ8N0X4 340 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ZNF548Q8NEK5 533 aaPredicted RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 OR6Y1Q8NGX8 325 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ZNF473Q8WTR7 871 aaKnown RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 NELL1Q92832 810 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 PYCR2Q96C36 320 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 LOXL4Q96JB6 756 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 CAMK1GQ96NX5 476 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ZNF382Q96SR6 550 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ELF4Q99607 663 aaPredicted RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 PRRX2Q99811 253 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 TMEM79Q9BSE2 394 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 HAUS8Q9BT25 410 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 NUSAP1Q9BXS6 441 aaKnown RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 SRMSQ9H3Y6 488 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 GSTO2Q9H4Y5 243 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 KIR3DX1Q9H7L2 352 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 NOL11Q9H8H0 719 aaKnown RBP9.48□□□□□ -0.89
CCM2-204ENST00000470837 ACTR8Q9H981 624 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ACSS2Q9NR19 701 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 KLHL14Q9P2G3 628 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 CIDEBQ9UHD4 219 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 KLF15Q9UIH9 416 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 SLC22A14Q9Y267 594 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 FIS1Q9Y3D6 152 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 LRRK1Q38SD2 2015 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 TRIOO75962 3097 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 PLXNB3Q9ULL4 1909 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 A0A0G2JND7 137 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 LRRC14BA6NHZ5 514 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 PRR19A6NJB7 356 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 LMO7DNF2Z398 122 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 AZIN1O14977 448 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 PIAS2O75928 621 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CCNDBP1O95273 360 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CLDN9O95484 217 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 ESRRBO95718 433 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CER1O95813 267 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 ENO1P06733 434 aaKnown RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 CHRNGP07510 517 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 EBLN1P0CF75 366 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 XRCC1P18887 633 aaPredicted RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 TSPAN8P19075 237 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 GNAZP19086 355 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 MPSTP25325 297 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 HMOX2P30519 316 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 GDF5P43026 501 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CTSKP43235 329 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 TBPL1P62380 186 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 IRF8Q02556 426 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 HHEXQ03014 270 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 HIST2H2ACQ16777 129 aaPredicted RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 C18orf21Q32NC0 220 aaPredicted RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 CCSMST1Q4G0I0 132 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 PRAMEF14Q5SWL7 426 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 PRAMEF13Q5VWM6 474 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 HIST2H2AA3Q6FI13 130 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 ARMC6Q6NXE6 501 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 KLHL35Q6PF15 583 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 XKR5Q6UX68 686 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 ACAD11Q709F0 780 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 RPS27LQ71UM5 84 aaKnown RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 AMIGO1Q86WK6 493 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 RASGRP3Q8IV61 690 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CACNA2D3Q8IZS8 1091 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CHCHD4Q8N4Q1 142 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 ZNF781Q8N8C0 355 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 CCDC197Q8NCU1 140 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 OR52E1Q8NGJ3 308 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 OR56A3Q8NH54 315 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 SETD7Q8WTS6 366 aaKnown RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 ZNF480Q8WV37 535 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 SLC22A18Q96BI1 424 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 THOC1Q96FV9 657 aaKnown RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 RILPQ96NA2 401 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 NSUN5Q96P11 429 aaKnown RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 TMEM74BQ9NUR3 256 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 GPRC5BQ9NZH0 403 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 OR6C2Q9NZP2 312 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 SCHIP1Q9P0W5 487 aaPredicted RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 CPNE7Q9UBL6 633 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 DCTN4Q9UJW0 460 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 PNMA8BQ9ULN7 279 aaPredicted RBP9.47□□□□□ -0.89
CCM2-204ENST00000470837 PLAGL1Q9UM63 463 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 SLC6A14Q9UN76 642 aa9.47□□□□□ -0.89
CCM2-204ENST00000470837 APOBEC2Q9Y235 224 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms