RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 HNMTP50135 292 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 PKNOX1P55347 436 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 ZXDAP98168 799 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 CTBSQ01459 385 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 TAP2Q03519 686 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 SFSWAPQ12872 951 aaKnown RBP8.09□□□□□ -1.11
GTF3A-206ENST00000470606 RPA4Q13156 261 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 ABRAXAS2Q15018 415 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 ZNF542PQ5EBM4 170 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 ADNP2Q6IQ32 1131 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 METTL2BQ6P1Q9 378 aaKnown RBP8.09□□□□□ -1.11
GTF3A-206ENST00000470606 TSSK4Q6SA08 328 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 SUSD1Q6UWL2 747 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 ASRGL1Q7L266 308 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 RD3Q7Z3Z2 195 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 GALNT13Q8IUC8 556 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 C2orf73Q8N5S3 287 aaPredicted RBP8.09□□□□□ -1.11
GTF3A-206ENST00000470606 STON2Q8WXE9 905 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 TFGQ92734 400 aaPredicted RBP8.09□□□□□ -1.11
GTF3A-206ENST00000470606 CCDC138Q96M89 665 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 SLC6A18Q96N87 628 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 CATSPER2Q96P56 530 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 TIMM29Q9BSF4 260 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 TRIM54Q9BYV2 358 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 OSGEPL1Q9H4B0 414 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 RMI1Q9H9A7 625 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 TBC1D29Q9UFV1 150 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 POLG2Q9UHN1 485 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 ASF1AQ9Y294 204 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 HS3ST3A1Q9Y663 406 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 COPG1Q9Y678 874 aaKnown RBP8.09□□□□□ -1.11
GTF3A-206ENST00000470606 NUP214P35658 2090 aaPredicted RBP8.09□□□□□ -1.11
GTF3A-206ENST00000470606 CROCCQ5TZA2 2017 aa8.09□□□□□ -1.11
GTF3A-206ENST00000470606 GPR179Q6PRD1 2367 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 A6NCN8 305 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 TRPC5OSA6NMA1 111 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 E7EQ34 232 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 PRAMEF26H0Y7S4 382 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 ZNF217O75362 1048 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 OTCP00480 354 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 PRR35P0CG20 571 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 NPPBP16860 134 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 AOC1P19801 751 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 NCF2P19878 526 aaPredicted RBP8.08□□□□□ -1.12
GTF3A-206ENST00000470606 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
GTF3A-206ENST00000470606 CPA2P48052 419 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 CCNG1P51959 295 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 TBPL1P62380 186 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 PLOD1Q02809 727 aaPredicted RBP8.08□□□□□ -1.12
GTF3A-206ENST00000470606 EIF2B5Q13144 721 aaKnown RBP8.08□□□□□ -1.12
GTF3A-206ENST00000470606 FZD2Q14332 565 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 METTL21CQ5VZV1 264 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 LRRC70Q7Z2Q7 622 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 MILR1Q7Z6M3 343 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 THOC6Q86W42 341 aaKnown RBP8.08□□□□□ -1.12
GTF3A-206ENST00000470606 KLHDC8AQ8IYD2 350 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 SFRP1Q8N474 314 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 RNF175Q8N4F7 328 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 KIF2BQ8N4N8 673 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 POU5F2Q8N7G0 328 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 LINC01555Q8NAE3 123 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 OR9A1PQ8NGU1 263 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 OR5K2Q8NHB8 316 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 C1orf216Q8TAB5 229 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 METTL6Q8TCB7 284 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 ACTRT2Q8TDY3 377 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 MED8Q96G25 268 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 FAR2Q96K12 515 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 WDR92Q96MX6 357 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 OR2M4Q96R27 311 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 MIPEPQ99797 713 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 CCDC28BQ9BUN5 200 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 PCDH15Q96QU1 1955 aa8.08□□□□□ -1.12
GTF3A-206ENST00000470606 A0A1W2PPV9 198 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 METTL12A8MUP2 240 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 CCDC22O60826 627 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 ENO1P06733 434 aaKnown RBP8.07□□□□□ -1.12
GTF3A-206ENST00000470606 ERGP11308 486 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 OXTRP30559 389 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 AKT2P31751 481 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 NEK2P51955 445 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 SRP54P61011 504 aaKnown RBP8.07□□□□□ -1.12
GTF3A-206ENST00000470606 NAA20P61599 178 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 KCNJ2P63252 427 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 KLF10Q13118 480 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 KRT72Q14CN4 511 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
GTF3A-206ENST00000470606 UAP1L1Q3KQV9 507 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 NXNQ6DKJ4 435 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 UNC5DQ6UXZ4 953 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 DDIASQ8IXT1 998 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 TCAIMQ8N3R3 496 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
GTF3A-206ENST00000470606 GBP7Q8N8V2 638 aaPredicted RBP8.07□□□□□ -1.12
GTF3A-206ENST00000470606 OR9I1Q8NGQ6 314 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 CEP70Q8NHQ1 597 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 NUDT8Q8WV74 236 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 SNX19Q92543 992 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 NEIL2Q969S2 332 aa8.07□□□□□ -1.12
GTF3A-206ENST00000470606 UTP4Q969X6 686 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms