RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 B3GAT1Q9P2W7 334 aa3.51□□□□□ -1.85
BRCA2-202ENST00000470094 CACNG4Q9UBN1 327 aa3.51□□□□□ -1.85
BRCA2-202ENST00000470094 CACNG5Q9UF02 275 aa3.51□□□□□ -1.85
BRCA2-202ENST00000470094 A0A087X002 238 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 ANKRD61A6NGH8 418 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 MEIS2O14770 477 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 KLF11O14901 512 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 ARHGEF9O43307 516 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 TBX10O75333 385 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 RAF1P04049 648 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 MAGEA11P43364 429 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 UBXN2AP68543 259 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 IRX1P78414 480 aaPredicted RBP3.5□□□□□ -1.85
BRCA2-202ENST00000470094 TEAD2Q15562 447 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 CBWD6Q4V339 395 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 TCP11X2Q5H9J9 407 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 CBWD3Q5JTY5 395 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 HECTD3Q5T447 861 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 RNASEH2BQ5TBB1 312 aaKnown RBP3.5□□□□□ -1.85
BRCA2-202ENST00000470094 PWWP2BQ6NUJ5 590 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 SLFN11Q7Z7L1 901 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 PIGZQ86VD9 579 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 TMEM139Q8IV31 216 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 CDK20Q8IZL9 346 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 POGLUT1Q8NBL1 392 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 NPEPL1Q8NDH3 523 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 OR2T11Q8NH01 316 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 HPSE2Q8WWQ2 592 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 SLAMF9Q96A28 289 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 SPDL1Q96EA4 605 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 PGAP3Q96FM1 320 aaPredicted RBP3.5□□□□□ -1.85
BRCA2-202ENST00000470094 SFXN2Q96NB2 322 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 DGAT2Q96PD7 388 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 FNBP1Q96RU3 617 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 OPRPNQ99935 248 aaPredicted RBP3.5□□□□□ -1.85
BRCA2-202ENST00000470094 P2RY12Q9H244 342 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 ERVMER34-1Q9H9K5 563 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 SERINC1Q9NRX5 453 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 FGF21Q9NSA1 209 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 MRGBPQ9NV56 204 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 ZNF701Q9NV72 531 aaPredicted RBP3.5□□□□□ -1.85
BRCA2-202ENST00000470094 PYGO1Q9Y3Y4 419 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 TRPV2Q9Y5S1 764 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 SNED1Q8TER0 1413 aa3.5□□□□□ -1.85
BRCA2-202ENST00000470094 hCG_1809904A0A1W2PP81 198 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 A0A1W2PPE2 198 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 A0A1W2PR64 198 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ANTXRLA6NF34 631 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 A8MXE2 369 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ABCB1P08183 1280 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 MYBL1P10243 752 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 VDRP11473 427 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 PFKFB1P16118 471 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 CEBPBP17676 345 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 EEF1DP29692 281 aaKnown RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 CTNNA1P35221 906 aaKnown RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 MNDAP41218 407 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 CAPZA2P47755 286 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 LIG4P49917 911 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ZNF75DP51815 510 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 B3GALT5-AS1P59052 145 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 HERV-K104P61576 105 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 SP3Q02447 781 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 PPARDQ03181 441 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 HSPB3Q12988 150 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 HNRNPDQ14103 355 aaKnown RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 SCARB2Q14108 478 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 C9orf152Q5JTZ5 239 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ZNF772Q68DY9 489 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 BHLHB9Q6PI77 547 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ZNF497Q6ZNH5 498 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 PLPPR4Q7Z2D5 763 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 RAB42Q8N4Z0 105 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 GPATCH11Q8N954 259 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 TDRD5Q8NAT2 981 aaKnown RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ZNF485Q8NCK3 441 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 TSPAN14Q8NG11 270 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 OR4C3Q8NH37 302 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 CFAP61Q8NHU2 1237 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 SSMEM1Q8WWF3 244 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ZNF653Q96CK0 615 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 WBP1Q96G27 269 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 SEPHS2Q99611 448 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ADPGKQ9BRR6 497 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 URM1Q9BTM9 101 aaKnown RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 PITPNM3Q9BZ71 974 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 MIS12Q9H081 205 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 RSPH9Q9H1X1 276 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 GKN1Q9NS71 199 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 ZDHHC18Q9NUE0 388 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 PLCXD1Q9NUJ7 323 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 BARHL2Q9NY43 387 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 GDE1Q9NZC3 331 aa3.49□□□□□ -1.85
BRCA2-202ENST00000470094 KLHL8Q9P2G9 620 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 CRNNQ9UBG3 495 aaPredicted RBP3.49□□□□□ -1.85
BRCA2-202ENST00000470094 DDX25Q9UHL0 483 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms