RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PPP4R1Q8TF05 950 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 NAT14Q8WUY8 206 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 USP7Q93009 1102 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TBC1D10AQ9BXI6 508 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 DPH1Q9BZG8 443 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 NMRAL1Q9HBL8 299 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 CPNE7Q9UBL6 633 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 FBXO5Q9UKT4 447 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 PCDHGA7Q9Y5G6 932 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 A0A087X1B8 175 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 PDZK1P1A8MUH7 402 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 STX7O15400 261 aaKnown RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 DUX1O43812 170 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 CCDC22O60826 627 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 T-ENOLP0DO92 83 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 THRAP10827 490 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 RALBP11234 206 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 GABRB3P28472 473 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 GPLD1P80108 840 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 POU4F1Q01851 419 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 USP10Q14694 798 aaKnown RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 ZDHHC20Q5W0Z9 365 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 GPR155Q7Z3F1 870 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TBC1D1Q86TI0 1168 aaPredicted RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 C10orf107Q8IVU9 208 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 PLD6Q8N2A8 252 aaKnown RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 RASGEF1AQ8N9B8 481 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 OR4K2Q8NGD2 314 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 PIWIL2Q8TC59 973 aaKnown RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 PMEPA1Q969W9 287 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TMEM159Q96B96 161 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 CCDC97Q96F63 343 aaPredicted RBP17.18■□□□□ 0.34
MRPL28-208ENST00000469744 TIMM29Q9BSF4 260 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 SLC39A10Q9ULF5 831 aa17.18■□□□□ 0.34
MRPL28-208ENST00000469744 SDK2Q58EX2 2172 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 KIR2DS5A0A0G2JLQ3 304 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 A0A0G2JNG1 304 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 A8MU76 341 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 C9orf172C9J069 976 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 G3V2L1 256 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 KIR2DS3K7RE56 304 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 SLC2A4P14672 509 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 ALOX15P16050 662 aaPredicted RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 CLCNKAP51800 687 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 CTSCP53634 463 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 RAB10P61026 200 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 ABCE1P61221 599 aaKnown RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 SRSF6Q13247 344 aaKnown RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 GTF2H3Q13889 308 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 SEPT6Q14141 434 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 KIR2DS5Q14953 304 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 TBCCQ15814 346 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 CLPPQ16740 277 aaPredicted RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 TSNAXIP1Q2TAA8 658 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 C11orf96Q7Z7L8 435 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 ZFAND4Q86XD8 727 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 PARP9Q8IXQ6 854 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 MAGEC3Q8TD91 643 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 NCSTNQ92542 709 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 AKAP7Q9P0M2 348 aaPredicted RBP17.17■□□□□ 0.34
MRPL28-208ENST00000469744 SLC2A6Q9UGQ3 507 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 FKBPLQ9UIM3 349 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 ACOT9Q9Y305 439 aa17.17■□□□□ 0.34
MRPL28-208ENST00000469744 FAM95CA0A1B0GW59 222 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 PRR19A6NJB7 356 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 OR2AG2A6NM03 316 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 OR52A4PA6NMU1 304 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 CCL22O00626 93 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 HGSO14964 777 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 NVLO15381 856 aaKnown RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 PRAMEF1O95521 474 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 STMN1P16949 149 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 LPOP22079 712 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 SERPINB3P29508 390 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 PBLDP30039 288 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 SLC1A2P43004 574 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 HK2P52789 917 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 KCNJ2P63252 427 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 UBE2IP63279 158 aaKnown RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 SQSTM1Q13501 440 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 TAF1AQ15573 450 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 TMEM71Q6P5X7 295 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 ZYG11AQ6WRX3 759 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 RAPH1Q70E73 1250 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 DET1Q7L5Y6 550 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 DDHD1Q8NEL9 900 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 OR13C4Q8NGS5 318 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 STON2Q8WXE9 905 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 NSL1Q96IY1 281 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 C20orf27Q9GZN8 174 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 CAB39LQ9H9S4 337 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 ZNF624Q9P2J8 865 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 KLHL3Q9UH77 587 aa17.16■□□□□ 0.34
MRPL28-208ENST00000469744 CORO1CQ9ULV4 474 aaPredicted RBP17.16■□□□□ 0.34
MRPL28-208ENST00000469744 OR5K4A6NMS3 321 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 C2orf81A6NN90 581 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 GOLGA8TH3BQL2 631 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms