RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SUSD3Q96L08 255 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 CSPG4P5Q96PW8 444 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 ASB2Q96Q27 587 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 SLC22A12Q96S37 553 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 C6orf62Q9GZU0 229 aaPredicted RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 TLR9Q9NR96 1032 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 CATSPERZQ9NTU4 200 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 VPS28Q9UK41 221 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 BAIAP2Q9UQB8 552 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 CBY1Q9Y3M2 126 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 ADRA1BP35368 520 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 EIF2DP41214 584 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 CDKN2BP42772 138 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 RECQLP46063 649 aaPredicted RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 MAP2K6P52564 334 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 PRMT2P55345 433 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 KRR1Q13601 381 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 PTPRRQ15256 657 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 HIF1AQ16665 826 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 HIST2H2ACQ16777 129 aaPredicted RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 CDKL4Q5MAI5 379 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 C5orf46Q6UWT4 87 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 GDPD3Q7L5L3 318 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 DNAJB7Q7Z6W7 309 aaPredicted RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 DDX53Q86TM3 631 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 METTL4Q8N3J2 472 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 MRPS31Q92665 395 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 MTFMTQ96DP5 389 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 TMEM68Q96MH6 324 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 ING2Q9H160 280 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 BRD9Q9H8M2 597 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 LRRC40Q9H9A6 602 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 TLR8Q9NR97 1041 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 RBM22Q9NW64 420 aaKnown RBP eCLIP9.74□□□□□ -0.85
NUP50-214ENST00000469163 NUFIP1Q9UHK0 495 aaKnown RBP9.74□□□□□ -0.85
NUP50-214ENST00000469163 DOCK6Q96HP0 2047 aa9.74□□□□□ -0.85
NUP50-214ENST00000469163 PARP14Q460N5 1801 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PRSS51A0A1B0GVH4 220 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PIPSLA2A3N6 862 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SCAMP1O15126 338 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 LCKP06239 509 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 POLR2IP36954 125 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 NRIP1P48552 1158 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 C21orf58P58505 322 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 BNC1Q01954 994 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PTP4A2Q12974 167 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CYP27C1Q4G0S4 372 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ZC3H12BQ5HYM0 836 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 PDPK2PQ6A1A2 396 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ZNF517Q6ZMY9 492 aaPredicted RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 HDDC2Q7Z4H3 204 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 COLGALT1Q8NBJ5 622 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 KLHL6Q8WZ60 621 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 DLG3Q92796 817 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 RNF157Q96PX1 679 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 RTP3Q9BQQ7 232 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SYT11Q9BT88 431 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 LHX5Q9H2C1 402 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 OSER1Q9NX31 292 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 IFT80Q9P2H3 777 aaPredicted RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 OGDHLQ9ULD0 1010 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PNMA8BQ9ULN7 279 aaPredicted RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 COPEO14579 308 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CAPN5O15484 640 aaPredicted RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 TPST1O60507 370 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ZNF623O75123 536 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 GJB3O75712 270 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CCNDBP1O95273 360 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 TIMP1P01033 207 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CD63P08962 238 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 WARSP23381 471 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 GKP32189 559 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ATP5C1P36542 298 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 GMPRP36959 345 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CASP6P55212 293 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 NME5P56597 212 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 RNF4P78317 190 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ZNF235Q14590 738 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 POU4F3Q15319 338 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SLC25A52Q3SY17 297 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 MROH9Q5TGP6 573 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SLC6A19Q695T7 634 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CNKSR3Q6P9H4 555 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 LACC1Q8IV20 430 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 CRYBG2Q8N1P7 616 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 PLD5Q8N7P1 536 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 KDM1BQ8NB78 822 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 OR6Q1Q8NGQ2 317 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 RHOXF1Q8NHV9 184 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 TFAP2CQ92754 450 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 ILKAPQ9H0C8 392 aaPredicted RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 RAB23Q9ULC3 237 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 RGSL1A5PLK6 1076 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 SDR42E2A6NKP2 422 aa9.73□□□□□ -0.85
NUP50-214ENST00000469163 LYPLA1O75608 230 aaPredicted RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 GOT2P00505 430 aaKnown RBP9.73□□□□□ -0.85
NUP50-214ENST00000469163 COX4I1P13073 169 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms