RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ATP6AP1LQ52LC2 224 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 SPATA19Q7Z5L4 167 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 LONP2Q86WA8 852 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 SNX32Q86XE0 403 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 DCUN1D3Q8IWE4 304 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 OR5AR1Q8NGP9 310 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 OR2T11Q8NH01 316 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 RP9Q8TA86 221 aaKnown RBP18.43■□□□□ 0.54
SMC4-209ENST00000468653 RAD51AP1Q96B01 352 aa18.43■□□□□ 0.54
SMC4-209ENST00000468653 SCARF2Q96GP6 870 aaPredicted RBP18.43■□□□□ 0.54
SMC4-209ENST00000468653 MAGEB10Q96LZ2 347 aaPredicted RBP18.43■□□□□ 0.54
SMC4-209ENST00000468653 CARS2Q9HA77 564 aaKnown RBP18.43■□□□□ 0.54
SMC4-209ENST00000468653 TDRKHQ9Y2W6 561 aaKnown RBP18.43■□□□□ 0.54
SMC4-209ENST00000468653 PSMD12O00232 456 aaPredicted RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 MANBAO00462 879 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 ZNF217O75362 1048 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 APBB3O95704 486 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 KRT6AP02538 564 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 KRT6BP04259 564 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 ALDOCP09972 364 aaKnown RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 CD6P30203 668 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 KRT6CP48668 564 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 IRF8Q02556 426 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 CHIT1Q13231 466 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 TSTA3Q13630 321 aaPredicted RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 FASTKQ14296 549 aaKnown RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 HERC3Q15034 1050 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 GGTA1PQ4G0N0 100 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 SGO1Q5FBB7 561 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 CAPN13Q6MZZ7 669 aaPredicted RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 GCNT7Q6ZNI0 430 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 RBM15BQ8NDT2 890 aaKnown RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 WDR92Q96MX6 357 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 OR2M4Q96R27 311 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 HBEGFQ99075 208 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 MIPEPQ99797 713 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 GPR174Q9BXC1 333 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 SLC40A1Q9NP59 571 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 WSB2Q9NYS7 404 aaPredicted RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 ZNF490Q9ULM2 529 aaPredicted RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 SNX6Q9UNH7 406 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 PLEKHM1Q9Y4G2 1056 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 HS3ST3A1Q9Y663 406 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 CFAP20Q9Y6A4 193 aaKnown RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 MEI4A8MW99 385 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 PRAMEF26H0Y7S4 382 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 SLC28A1O00337 649 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 PRR35P0CG20 571 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 IDSP22304 550 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 THOP1P52888 689 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 CUL3Q13618 768 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 RPS6KA2Q15349 733 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 NR6A1Q15406 480 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 AGKQ53H12 422 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 OGFOD2Q6N063 350 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 Q6ZSR9 355 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 C10orf67Q8IYJ2 551 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 L3MBTL4Q8NA19 623 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 OR5K2Q8NHB8 316 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 FBXO27Q8NI29 283 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 MCUR1Q96AQ8 359 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 CADM1Q9BY67 442 aaKnown RBP18.42■□□□□ 0.54
SMC4-209ENST00000468653 TPSD1Q9BZJ3 242 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 TBC1D17Q9HA65 648 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 EBF2Q9HAK2 575 aa18.42■□□□□ 0.54
SMC4-209ENST00000468653 CLGNO14967 610 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 SCAMP1O15126 338 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 GSC2O15499 205 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 RGS14O43566 566 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 IGHV4-34P06331 123 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 PNLIPRP1P54315 467 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 YPEL5P62699 121 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 PRKG2Q13237 762 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 ZRSR2Q15696 482 aaKnown RBP18.41■□□□□ 0.54
SMC4-209ENST00000468653 GSTA3Q16772 222 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 DNAL1Q4LDG9 190 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 XKR6Q5GH73 641 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 CAPRIN2Q6IMN6 1127 aaKnown RBP18.41■□□□□ 0.54
SMC4-209ENST00000468653 SFRP1Q8N474 314 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 OR1E3Q8WZA6 343 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 C12orf66Q96MD2 445 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 RTKNQ9BST9 563 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 C1orf21Q9H246 121 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 TRIT1Q9H3H1 467 aaKnown RBP18.41■□□□□ 0.54
SMC4-209ENST00000468653 ELOVL6Q9H5J4 265 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 FARSBQ9NSD9 589 aaKnown RBP18.41■□□□□ 0.54
SMC4-209ENST00000468653 KCNE2Q9Y6J6 123 aa18.41■□□□□ 0.54
SMC4-209ENST00000468653 UGDHO60701 494 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 IDO1P14902 403 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 CD1EP15812 388 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 TBPL1P62380 186 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 ERVK-8P63133 956 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 MAPRE2Q15555 327 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 IMPG1Q17R60 797 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 C6orf136Q5SQH8 315 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 LIPJQ5W064 366 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 RNF165Q6ZSG1 346 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 RD3Q7Z3Z2 195 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 MIER2Q8N344 545 aa18.4■□□□□ 0.54
SMC4-209ENST00000468653 FNDC5Q8NAU1 212 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms