RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SDHBP21912 280 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 KCNA4P22459 653 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 MAP4P27816 1152 aaKnown RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 IMPA1P29218 277 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 PRKAA2P54646 552 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 ALDH18A1P54886 795 aaKnown RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 DNAJB13P59910 316 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 IL9RQ01113 521 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 TAP2Q03519 686 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 RELAQ04206 551 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 KIR2DS3Q14952 304 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 SEPT7Q16181 437 aaKnown RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 ZXDCQ2QGD7 858 aaPredicted RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 KLHL35Q6PF15 583 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 WDR74Q6RFH5 385 aaPredicted RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 GPSM1Q86YR5 675 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 SLC22A9Q8IVM8 553 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 SFTPA2Q8IWL1 248 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 ADGRF3Q8IZF5 1079 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 RAB42Q8N4Z0 105 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 EID2Q8N6I1 236 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 OR6Y1Q8NGX8 325 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 SETD7Q8WTS6 366 aaKnown RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 ZNF480Q8WV37 535 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 SLC22A18Q96BI1 424 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 FERD3LQ96RJ6 166 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 PKP4Q99569 1192 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 PCBD2Q9H0N5 130 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 ALG9Q9H6U8 611 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 ZNF358Q9NW07 568 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 STOX2Q9P2F5 926 aaPredicted RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 LRIT1Q9P2V4 623 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 LNPEPQ9UIQ6 1025 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 ICKQ9UPZ9 632 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 TNPO3Q9Y5L0 923 aaKnown RBP10.93□□□□□ -0.66
MSH5-214ENST00000468602 RNF215Q9Y6U7 377 aa10.93□□□□□ -0.66
MSH5-214ENST00000468602 PCM1Q15154 2024 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 WDR87Q6ZQQ6 2873 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 MN1Q10571 1320 aaPredicted RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 IGHV1OR21-1A0A087WYE8 117 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 A0A1W2PPV9 198 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 GOLGA8RI6L899 631 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 BIRC5O15392 142 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 GDF9O60383 454 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 LDOC1O95751 146 aaPredicted RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 SLC16A8O95907 504 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 CREB1P16220 341 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 ACADVLP49748 655 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 MAZP56270 477 aaKnown RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 MAGOHP61326 146 aaKnown RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 SETDB1Q15047 1291 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 CCSMST1Q4G0I0 132 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 N4BP2L1Q5TBK1 243 aaPredicted RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 ZYG11AQ6WRX3 759 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 SPRED1Q7Z699 444 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 AMIGO1Q86WK6 493 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 TRIM48Q8IWZ4 208 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 C4orf33Q8N1A6 199 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 SPATA6LQ8N4H0 392 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 LINC01555Q8NAE3 123 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 FLVCR1-AS1Q8TAF5 88 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 TCP10LQ8TDR4 215 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 RHBDD1Q8TEB9 315 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 SMPDL3AQ92484 453 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 L3HYPDHQ96EM0 354 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 CNDP2Q96KP4 475 aaKnown RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 CD180Q99467 661 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 SARGQ9BW04 601 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 CNOT10Q9H9A5 744 aaKnown RBP10.92□□□□□ -0.66
MSH5-214ENST00000468602 FAM53CQ9NYF3 392 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 OGFRQ9NZT2 677 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 COPG2Q9UBF2 871 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 XPR1Q9UBH6 696 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 FTSJ1Q9UET6 329 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 RNF112Q9ULX5 631 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 UNC13CQ8NB66 2214 aa10.92□□□□□ -0.66
MSH5-214ENST00000468602 OR5K3A6NET4 321 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 RHPN2P1A8MT19 583 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 FOXO6A8MYZ6 492 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 TK2O00142 265 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 TAPBPO15533 448 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 B4GAT1O43505 415 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 SH3BP5O60239 455 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 SNUPNO95149 360 aaKnown RBP10.91□□□□□ -0.66
MSH5-214ENST00000468602 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
MSH5-214ENST00000468602 ANKRD34CP0C6C1 535 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 MSL3P1P0C860 447 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 CEACAM1P13688 526 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 TAC1P20366 129 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 HRH2P25021 359 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 SERPINB5P36952 375 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 GMPRP36959 345 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 CASP2P42575 452 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 BDKRB1P46663 353 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 CAPZBP47756 277 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 PNLIPRP1P54315 467 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 ABATP80404 500 aa10.91□□□□□ -0.66
MSH5-214ENST00000468602 E2F1Q01094 437 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms