RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SMARCAL1Q9NZC9 954 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 KLHL20Q9Y2M5 609 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 CSMD2Q7Z408 3487 aa12.56□□□□□ -0.4
PTPN7-207ENST00000468385 DOCK10Q96BY6 2186 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 QSOX1O00391 747 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 STSP08842 583 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 TPH1P17752 444 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 PKLRP30613 574 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 ARSFP54793 590 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 EIF3EP60228 445 aaKnown RBP12.55□□□□□ -0.4
PTPN7-207ENST00000468385 COPS2P61201 443 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 ITIH4Q14624 930 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 CCDC181Q5TID7 509 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 KCTD11Q693B1 232 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 C11orf63Q6NUN7 778 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 TMTC1Q8IUR5 882 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 MCATQ8IVS2 390 aaKnown RBP12.55□□□□□ -0.4
PTPN7-207ENST00000468385 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 LINC01555Q8NAE3 123 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 STYXQ8WUJ0 223 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-207ENST00000468385 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 LHPPQ9H008 270 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 SOX17Q9H6I2 414 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-207ENST00000468385 TFR2Q9UP52 801 aa12.55□□□□□ -0.4
PTPN7-207ENST00000468385 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN7-207ENST00000468385 SNRNP200O75643 2136 aaKnown RBP12.55□□□□□ -0.4
PTPN7-207ENST00000468385 OR51F1A6NGY5 319 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 DSCR3O14972 297 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 PJA2O43164 708 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 CBFA2T2O43439 604 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 FTH1P02794 183 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 TPM1P09493 284 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 PIM1P11309 404 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 MCM3P25205 808 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 PSMA3P25788 255 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 MAGEA1P43355 309 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 RAB28P51157 221 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 Q0VFX4 171 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 POU6F1Q14863 301 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 TLR1Q15399 786 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 TUBB8Q3ZCM7 444 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 IRAK1BP1Q5VVH5 260 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 FCRL6Q6DN72 434 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 RPUSD3Q6P087 351 aaKnown RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 SHISA6Q6ZSJ9 500 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 FJX1Q86VR8 437 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 LMNTD1Q8N9Z9 388 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 CATSPER1Q8NEC5 780 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 DENND1AQ8TEH3 1009 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 THOC3Q96J01 351 aaKnown RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 EPS8L2Q9H6S3 715 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 MRM3Q9HC36 420 aaKnown RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 ENAMQ9NRM1 1142 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 CUTCQ9NTM9 273 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 EFR3BQ9Y2G0 817 aa12.54□□□□□ -0.4
PTPN7-207ENST00000468385 DIDO1Q9BTC0 2240 aaKnown RBP12.54□□□□□ -0.4
PTPN7-207ENST00000468385 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 PRSS44E7EML9 344 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 KDM1AO60341 852 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 KLHL18O94889 574 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 CTNNA2P26232 953 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 FOXN2P32314 431 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 CTNNA1P35221 906 aaKnown RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 PTPN7P35236 360 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 GRIA3P42263 894 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 OR1D4P47884 311 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 PLOD1Q02809 727 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 MFAP5Q13361 173 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 GRB7Q14451 532 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 RBBP7Q16576 425 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 SYTL3Q4VX76 610 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 FAM180AQ6UWF9 173 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 LINC00696Q6ZRV3 163 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 DTWD1Q8N5C7 304 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 OR11G2Q8NGC1 345 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 LRRC45Q96CN5 670 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 MOCOSQ96EN8 888 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 TRIM56Q9BRZ2 755 aaKnown RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 SEMA3GQ9NS98 782 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
PTPN7-207ENST00000468385 PIH1D1Q9NWS0 290 aaKnown RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms