RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 KNOP1Q1ED39 458 aaKnown RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 EDRF1Q3B7T1 1238 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 NADK2Q4G0N4 442 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 PRR30Q53SZ7 412 aaPredicted RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 ZRANB3Q5FWF4 1079 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 C1orf220Q5T0J3 134 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 DCAF12Q5T6F0 453 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 C11orf87Q6NUJ2 197 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 SPNS3Q6ZMD2 512 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 ZNF783Q6ZMS7 281 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 DPY19L3Q6ZPD9 716 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 PARS2Q7L3T8 475 aaKnown RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 PPP1R32Q7Z5V6 425 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 TAC4Q86UU9 113 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 APLFQ8IW19 511 aaPredicted RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 DCAF4L2Q8NA75 395 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 ATP11CQ8NB49 1132 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 CCDC150Q8NCX0 1101 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 FAM46DQ8NEK8 389 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 OR4D9Q8NGE8 314 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 OR52K2Q8NGK3 314 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 TAS1R2Q8TE23 839 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 TMEM174Q8WUU8 243 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 TSACCQ96A04 125 aaPredicted RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 RAB7BQ96AH8 199 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 CENPTQ96BT3 561 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 LURAP1Q96LR2 239 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 OSBPL9Q96SU4 736 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 PSMB7Q99436 277 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 SPRY4Q9C004 299 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 LRRC27Q9C0I9 530 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 RDH14Q9HBH5 336 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 DMAC2Q9NW81 257 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 SLC39A1Q9NY26 324 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 KLQ9UEF7 1012 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 VPS51Q9UID3 782 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 ITM2BQ9Y287 266 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 TMEM184BQ9Y519 407 aaPredicted RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 SRPRBQ9Y5M8 271 aaKnown RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.751e-7■■■□□ 15.6
SSR3-204ENST00000467733 COL6A5A8TX70 2615 aa4.11□□□□□ -1.75
SSR3-204ENST00000467733 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
SSR3-204ENST00000467733 ATRQ13535 2644 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 ABCA4P78363 2273 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 HEATR9A2RTY3 570 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 TMEM110-MUSTN1A8MSY1 372 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 K7ERQ8 282 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 O00370 1275 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 AREL1O15033 823 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 MAPK13O15264 365 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 PHGDHO43175 533 aaKnown RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 ZW10O43264 779 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SMAD6O43541 496 aaKnown RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 SNAP91O60641 907 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 LRCH4O75427 683 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 CLDN11O75508 207 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 STK17BO94768 372 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 UNC5CO95185 931 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 IGLV3-25P01717 112 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 FYNP06241 537 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 TRIM49P0CI25 452 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 TRIM49CP0CI26 452 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 CHRM3P20309 590 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 MAN1A1P33908 653 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 GCLMP48507 274 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 RGS7P49802 495 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 PEX5P50542 639 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 AGFG1P52594 562 aaKnown RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 OR1D5P58170 312 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 LOXL3P58215 753 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SRP54P61011 504 aaKnown RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 KRT83P78385 493 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 NFATC4Q14934 902 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 IQCB1Q15051 598 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 PTPRRQ15256 657 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 GFOD2Q3B7J2 385 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 AMZ1Q400G9 498 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 FAM153CQ494X1 144 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 TEDDM1Q5T9Z0 273 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SPECC1LQ69YQ0 1117 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SUMO4Q6EEV6 95 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SFRP4Q6FHJ7 346 aaPredicted RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 FBXL22Q6P050 247 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 NPNTQ6UXI9 565 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 CEACAM20Q6UY09 585 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 UNC13DQ70J99 1090 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 BEND5Q7L4P6 421 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 KDELC2Q7Z4H8 507 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 TAF8Q7Z7C8 310 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 AMIGO2Q86SJ2 522 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SFTPA2Q8IWL1 248 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 NRSN1Q8IZ57 195 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 ESX1Q8N693 406 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 PCDH20Q8N6Y1 951 aaKnown RBP4.1□□□□□ -1.75
SSR3-204ENST00000467733 BMPERQ8N8U9 685 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 ATP6V0D2Q8N8Y2 350 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 SEMA6DQ8NFY4 1073 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 KIAA1524Q8TCG1 905 aa4.1□□□□□ -1.75
SSR3-204ENST00000467733 CLEC4CQ8WTT0 213 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms