RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 PKP4Q99569 1192 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 GPR22Q99680 433 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 RBBP8Q99708 897 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 RAB11FIP5Q9BXF6 653 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 SLC12A9Q9BXP2 914 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 ACSS3Q9H6R3 686 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 SYTL2Q9HCH5 934 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
SSBP1-206ENST00000467681 CACNA1BQ00975 2339 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 PCM1Q15154 2024 aa13.17□□□□□ -0.3
SSBP1-206ENST00000467681 ISM1B1AKI9 464 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 FAM155BO75949 473 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 ACSL3O95573 720 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 C8GP07360 202 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 UGT2B7P16662 529 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 CDH3P22223 829 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 ARL4DP49703 201 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 USP10Q14694 798 aaKnown RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 ARHGAP19Q14CB8 494 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 UBE2R2Q712K3 238 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 PROSER1Q86XN7 944 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 CEP97Q8IW35 865 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 MYO1HQ8N1T3 1032 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
SSBP1-206ENST00000467681 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 SLC22A18Q96BI1 424 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 TSPAN17Q96FV3 270 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 DDA1Q9BW61 102 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 TXLNGYQ9BZA5 131 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 ASPSCR1Q9BZE9 553 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 PARVBQ9HBI1 364 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 SPATA7Q9P0W8 599 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 BTRCQ9Y297 605 aa13.16□□□□□ -0.3
SSBP1-206ENST00000467681 C9orf172C9J069 976 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 POLR1CO15160 346 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-206ENST00000467681 TLX3O43711 291 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-206ENST00000467681 PRAMEF10O60809 474 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 WISP3O95389 354 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-206ENST00000467681 SLU7O95391 586 aaKnown RBP13.15□□□□□ -0.3
SSBP1-206ENST00000467681 ERGP11308 486 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 FOLR1P15328 257 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
SSBP1-206ENST00000467681 SLC12A2P55011 1212 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 RAB15P59190 212 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 SH3BP2P78314 561 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 IL11RAQ14626 422 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 EFTUD2Q15029 972 aaKnown RBP eCLIP13.15□□□□□ -0.34e-17■□□□□ 11.1
SSBP1-206ENST00000467681 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 DCAF12Q5T6F0 453 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 BPHLQ86WA6 291 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-206ENST00000467681 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 ZPBPQ9BS86 351 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 ADAMTS6Q9UKP5 1117 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 ACSL6Q9UKU0 697 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 PDE10AQ9Y233 779 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 B3GALT1Q9Y5Z6 326 aa13.15□□□□□ -0.3
SSBP1-206ENST00000467681 A0A1W2PPV9 198 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 KRT87PA6NCN2 255 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 MAP3K7O43318 606 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 FKBP9O95302 570 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 SLC16A8O95907 504 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 FGF5P12034 268 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 PVRP15151 417 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 ST6GAL1P15907 406 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 ZNF37AP17032 561 aaPredicted RBP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 OAS2P29728 719 aaKnown RBP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 PMS2P54278 862 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 ACY1Q03154 408 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 FOXM1Q08050 763 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 SP140Q13342 867 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 FASTKQ14296 549 aaKnown RBP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 KCNAB1Q14722 419 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 SF1Q15637 639 aaKnown RBP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 TMTC4Q5T4D3 741 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 CEACAM20Q6UY09 585 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 TRIM73Q86UV7 250 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 ANKRD49Q8WVL7 239 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 PMEPA1Q969W9 287 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 MRRFQ96E11 262 aaKnown RBP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 CCDC138Q96M89 665 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 TEFMQ96QE5 360 aaKnown RBP13.14□□□□□ -0.31
SSBP1-206ENST00000467681 OR6C1Q96RD1 312 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 CTRCQ99895 268 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 CAB39LQ9H9S4 337 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 GPAMQ9HCL2 828 aa13.14□□□□□ -0.31
SSBP1-206ENST00000467681 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms