RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 USP27XA6NNY8 438 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 H3BMH7 237 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 SLC28A2O43868 658 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 OR2B3O76000 313 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 USP1O94782 785 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 S1PR4O95977 384 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 RAB40ALP0C0E4 278 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 CHRM3P20309 590 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 ATP5DP30049 168 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 NFKB2Q00653 900 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 THOC5Q13769 683 aaKnown RBP21.78■■□□□ 1.08
SSR2-204ENST00000467041 PPP1R7Q15435 360 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 UGT8Q16880 541 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 RNASEH2BQ5TBB1 312 aaKnown RBP21.78■■□□□ 1.08
SSR2-204ENST00000467041 FAM20CQ8IXL6 584 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 SYTL1Q8IYJ3 562 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 C2orf73Q8N5S3 287 aaPredicted RBP21.78■■□□□ 1.08
SSR2-204ENST00000467041 LMNTD1Q8N9Z9 388 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 PDLIM2Q96JY6 352 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 FOPNLQ96NB1 174 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 RAB11FIP5Q9BXF6 653 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 SPRTNQ9H040 489 aaPredicted RBP21.78■■□□□ 1.08
SSR2-204ENST00000467041 DDX47Q9H0S4 455 aaKnown RBP21.78■■□□□ 1.08
SSR2-204ENST00000467041 AP1M2Q9Y6Q5 423 aa21.78■■□□□ 1.08
SSR2-204ENST00000467041 CAPN1P07384 714 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 CCNFP41002 786 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 DEFB110Q30KQ9 67 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 CCSMST1Q4G0I0 132 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 ZNF470Q6ECI4 717 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 PRICKLE2Q7Z3G6 844 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 ZBTB2Q8N680 514 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 C9orf43Q8TAL5 461 aaPredicted RBP21.77■■□□□ 1.08
SSR2-204ENST00000467041 SLCO2A1Q92959 643 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 FAM136AQ96C01 138 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 ABHD17AQ96GS6 310 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 DPH2Q9BQC3 489 aaPredicted RBP21.77■■□□□ 1.08
SSR2-204ENST00000467041 NLNQ9BYT8 704 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 GALPQ9UBC7 116 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 PLCL2Q9UPR0 1127 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 RUVBL2Q9Y230 463 aaKnown RBP21.77■■□□□ 1.08
SSR2-204ENST00000467041 MAD1L1Q9Y6D9 718 aa21.77■■□□□ 1.08
SSR2-204ENST00000467041 CTAGE9A4FU28 777 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 SUV39H1O43463 412 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 PRICKLE3O43900 615 aaPredicted RBP21.76■■□□□ 1.07
SSR2-204ENST00000467041 MATN4O95460 622 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 MAGP20916 626 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 BDKRB1P46663 353 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 CTBP1Q13363 440 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 SF1Q15637 639 aaKnown RBP21.76■■□□□ 1.07
SSR2-204ENST00000467041 PTCHD3Q3KNS1 767 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 ZNF385CQ66K41 422 aaPredicted RBP21.76■■□□□ 1.07
SSR2-204ENST00000467041 CNSTQ6PJW8 725 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 TAX1BP1Q86VP1 789 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 DENND6AQ8IWF6 608 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 LMNTD2Q8IXW0 634 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 RAB42Q8N4Z0 105 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 ENDOVQ8N8Q3 282 aaKnown RBP21.76■■□□□ 1.07
SSR2-204ENST00000467041 HMGCLL1Q8TB92 370 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 MAGEC3Q8TD91 643 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 THAP4Q8WY91 577 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 PCYOX1Q9UHG3 505 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 MAN2B2Q9Y2E5 1009 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 KLHL20Q9Y2M5 609 aa21.76■■□□□ 1.07
SSR2-204ENST00000467041 E5RI56 91 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 FKBP9O95302 570 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 CTSBP07858 339 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 AGXTP21549 392 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 PMS2P54278 862 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 GNG11P61952 73 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 IL10RAQ13651 578 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 PTK6Q13882 451 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 LONRF1Q17RB8 773 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 PAPD7Q5XG87 772 aaKnown RBP21.75■■□□□ 1.07
SSR2-204ENST00000467041 RHBDD2Q6NTF9 364 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 TLDC1Q6P9B6 456 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 FAM198BQ6UWH4 519 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 APLFQ8IW19 511 aaPredicted RBP21.75■■□□□ 1.07
SSR2-204ENST00000467041 DENND1AQ8TEH3 1009 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 ZNF71Q9NQZ8 489 aaPredicted RBP21.75■■□□□ 1.07
SSR2-204ENST00000467041 C20orf96Q9NUD7 363 aaPredicted RBP21.75■■□□□ 1.07
SSR2-204ENST00000467041 INTS7Q9NVH2 962 aaKnown RBP21.75■■□□□ 1.07
SSR2-204ENST00000467041 EURLQ9NYK6 297 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.75■■□□□ 1.07
SSR2-204ENST00000467041 ASIC3Q9UHC3 531 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 TCFL5Q9UL49 500 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 FAM169AQ9Y6X4 670 aa21.75■■□□□ 1.07
SSR2-204ENST00000467041 DNALI1O14645 258 aaPredicted RBP21.74■■□□□ 1.07
SSR2-204ENST00000467041 PTGIRP43119 386 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 CLCN7P51798 805 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 ACSBG2Q5FVE4 666 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 ATG14Q6ZNE5 492 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 PCGF5Q86SE9 256 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 PTRH1Q86Y79 214 aaKnown RBP21.74■■□□□ 1.07
SSR2-204ENST00000467041 CALML6Q8TD86 181 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 FBXO6Q9NRD1 293 aaPredicted RBP21.74■■□□□ 1.07
SSR2-204ENST00000467041 SNX7Q9UNH6 387 aa21.74■■□□□ 1.07
SSR2-204ENST00000467041 KRT87PA6NCN2 255 aa21.73■■□□□ 1.07
SSR2-204ENST00000467041 ZSCAN9O15535 394 aaPredicted RBP21.73■■□□□ 1.07
SSR2-204ENST00000467041 RFPL1O75677 317 aa21.73■■□□□ 1.07
SSR2-204ENST00000467041 F7P08709 466 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms