RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 AKAP7Q9P0M2 348 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 CTNNAL1Q9UBT7 734 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 ANGPTL2Q9UKU9 493 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 POMT2Q9UKY4 750 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 NOVA2Q9UNW9 492 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 ACOT9Q9Y305 439 aa13.99□□□□□ -0.17
DNMT3A-208ENST00000466601 SPEGQ15772 3267 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 A0A087X1B8 175 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 A0A096LPK6 155 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 PABPN1LA6NDY0 278 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 NPEPPSL1A6NEC2 478 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 TLCD2A6NGC4 264 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ZNF839A8K0R7 811 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ISM1B1AKI9 464 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 TRIM49D1C9J1S8 452 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 SLC16A8O95907 504 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ENO2P09104 434 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 LTA4HP09960 611 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ANKRD34CP0C6C1 535 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ERGP11308 486 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 CD1DP15813 335 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 UGT2B7P16662 529 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 PEBP1P30086 187 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 CSTF2P33240 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 GMPRP36959 345 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 SLC26A3P40879 764 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 PNLIPRP1P54315 467 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ATP6V0D1P61421 351 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 EIF3IQ13347 325 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 FASTKQ14296 549 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 TAF1BQ53T94 588 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 SBSNQ6UWP8 590 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 RAB11FIP2Q7L804 512 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 TAX1BP1Q86VP1 789 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 MREGQ8N565 214 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 AGBL5Q8NDL9 886 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 WDR36Q8NI36 951 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 HMGCLL1Q8TB92 370 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ISL2Q96A47 359 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 SLC22A18Q96BI1 424 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 MTBPQ96DY7 904 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 CCDC138Q96M89 665 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 PPM1MQ96MI6 270 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 OR2A14Q96R47 310 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 CMKLR1Q99788 373 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 VPS11Q9H270 941 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 ZNF768Q9H5H4 540 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 PPCSQ9HAB8 311 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 SEMA5BQ9P283 1151 aa13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 PSMC3IPQ9P2W1 217 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-208ENST00000466601 KNTC1P50748 2209 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 IGHV5-51A0A0C4DH38 117 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 IQANK1A0A1B0GTG1 560 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 NUDT17P0C025 328 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 CDH3P22223 829 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 IMPA1P29218 277 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 OAS2P29728 719 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 MAGEA12P43365 314 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 SEPHS1P49903 392 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 AP1S2P56377 157 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 DLG1Q12959 904 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 TSNQ15631 228 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 C3orf38Q5JPI3 329 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 FBXO38Q6PIJ6 1188 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 SPESP1Q6UW49 350 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 TIFABQ6ZNK6 161 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 ADAMTSL2Q86TH1 951 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 SYTL1Q8IYJ3 562 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 CNPY4Q8N129 248 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 CARFQ8N187 725 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 FBXO39Q8N4B4 442 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 FLVCR1-AS1Q8TAF5 88 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 ZNF480Q8WV37 535 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 KCTD4Q8WVF5 259 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 KLHL6Q8WZ60 621 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 SMPDL3AQ92484 453 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 NXNL1Q96CM4 212 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 NRSN2Q9GZP1 204 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 NMRAL1Q9HBL8 299 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 C1GALT1Q9NS00 363 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 IGSF5Q9NSI5 407 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 ARL15Q9NXU5 204 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 STOX2Q9P2F5 926 aaPredicted RBP13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 TBK1Q9UHD2 729 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 LOXL2Q9Y4K0 774 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 OARD1Q9Y530 152 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 SPTBN2O15020 2390 aa13.97□□□□□ -0.17
DNMT3A-208ENST00000466601 A0A1W2PNU3 283 aaPredicted RBP13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 A0A1W2PPV9 198 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 TRABD2BA6NFA1 517 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 SMIM23A6NLE4 172 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 PLD2O14939 933 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 PRICKLE3O43900 615 aaPredicted RBP13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 GUCA1CO95843 209 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 MPOP05164 745 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 SLCO1A2P46721 670 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 LSSP48449 732 aa13.96□□□□□ -0.17
DNMT3A-208ENST00000466601 IRF9Q00978 393 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms