RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 B3GNT4Q9C0J1 378 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 TLK1Q9UKI8 766 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 PLAGL1Q9UM63 463 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 ACOT9Q9Y305 439 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 AKAP13Q12802 2813 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 A0A087X1B8 175 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 HMX2A2RU54 273 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 TRABD2BA6NFA1 517 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 PLD2O14939 933 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 PHGDHO43175 533 aaKnown RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 MAP3K7O43318 606 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 DXOO77932 396 aaKnown RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 ZBTB11O95625 1053 aaPredicted RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 SNRPAP09012 282 aaKnown RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 CCDC166P0CW27 439 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 SPINK2P20155 84 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 MPSTP25325 297 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 TYK2P29597 1187 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 CSRP3P50461 194 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 KPNA2P52292 529 aaKnown RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 PNLIPRP1P54315 467 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 ZNF460Q14592 562 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 C16orf72Q14CZ0 275 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 RASA2Q15283 850 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 SLC5A12Q1EHB4 618 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 CCSMST1Q4G0I0 132 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 TAF1BQ53T94 588 aaPredicted RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 SPESP1Q6UW49 350 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 FAM92BQ6ZTR7 304 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 TBC1D1Q86TI0 1168 aaPredicted RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 LINC01555Q8NAE3 123 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 RCBTB1Q8NDN9 531 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 DENND1AQ8TEH3 1009 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 ANKRD49Q8WVL7 239 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 OR2A14Q96R47 310 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 PKP4Q99569 1192 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 CHRNA10Q9GZZ6 450 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 CTNNAL1Q9UBT7 734 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 KLHL3Q9UH77 587 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 SATB2Q9UPW6 733 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 PDE10AQ9Y233 779 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 LOXL2Q9Y4K0 774 aa16.39■□□□□ 0.21
USP39-211ENST00000465282 SNRNP200O75643 2136 aaKnown RBP16.39■□□□□ 0.21
USP39-211ENST00000465282 A8MU76 341 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 ISM1B1AKI9 464 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 B4E171 279 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 PRICKLE3O43900 615 aaPredicted RBP16.38■□□□□ 0.21
USP39-211ENST00000465282 SLC16A8O95907 504 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 SYF2O95926 243 aaKnown RBP16.38■□□□□ 0.21
USP39-211ENST00000465282 JMJD7P0C870 316 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 SLC35E2BP0CK96 405 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 NELFEP18615 380 aaKnown RBP16.38■□□□□ 0.21
USP39-211ENST00000465282 CDH3P22223 829 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 HSD17B3P37058 310 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 TSPAN7P41732 249 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 PGGT1BP53609 377 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 HSD11B2P80365 405 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 CDKL1Q00532 357 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 NAA25Q14CX7 972 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 SBSNQ6UWP8 590 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 MARCH9Q86YJ5 346 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 MREGQ8N565 214 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 ATL1Q8WXF7 558 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 SMPDL3AQ92484 453 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 DLG3Q92796 817 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 SLC41A2Q96JW4 573 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 MAP3K3Q99759 626 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 NMRAL1Q9HBL8 299 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 FBXO8Q9NRD0 319 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 SNX15Q9NRS6 342 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 INTS7Q9NVH2 962 aaKnown RBP16.38■□□□□ 0.21
USP39-211ENST00000465282 DKK4Q9UBT3 224 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 ADAMTS6Q9UKP5 1117 aa16.38■□□□□ 0.21
USP39-211ENST00000465282 IGHV5-51A0A0C4DH38 117 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 IQANK1A0A1B0GTG1 560 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 KIF1CO43896 1103 aaKnown RBP16.37■□□□□ 0.21
USP39-211ENST00000465282 ALDOAP04075 364 aaKnown RBP16.37■□□□□ 0.21
USP39-211ENST00000465282 MPOP05164 745 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 C2P06681 752 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 LTA4HP09960 611 aaKnown RBP16.37■□□□□ 0.21
USP39-211ENST00000465282 NUDT17P0C025 328 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 MSL3P1P0C860 447 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 COL6A2P12110 1019 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 UGT2B7P16662 529 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 CCND1P24385 295 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 RBMS1P29558 406 aaKnown RBP16.37■□□□□ 0.21
USP39-211ENST00000465282 OAS2P29728 719 aaKnown RBP16.37■□□□□ 0.21
USP39-211ENST00000465282 MAGEA12P43365 314 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 ARL4DP49703 201 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 RAB15P59190 212 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 PPP1CAP62136 330 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 GABREP78334 506 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 BMPR2Q13873 1038 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 FAM83EQ2M2I3 478 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 C3orf38Q5JPI3 329 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 CDKL4Q5MAI5 379 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 FBXO38Q6PIJ6 1188 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 TIFABQ6ZNK6 161 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 CMC1Q7Z7K0 106 aa16.37■□□□□ 0.21
USP39-211ENST00000465282 BPHLQ86WA6 291 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms