RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	PCDHGA5	Q9Y5G8	931 aa		4.96	□□□□□ -1.62
CACNA1C-223	ENST00000465278		V9GYY5	206 aa	Predicted RBP	4.96	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CCDC171	Q6TFL3	1326 aa		4.96	□□□□□ -1.62
CACNA1C-223	ENST00000465278		A0A0D9SFI3	127 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LNP1	A1A4G5	178 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GOLGA6L19	H0YKK7	550 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	AP3D1	O14617	1153 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZIC3	O60481	467 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PAGE4	O60829	102 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ENTPD3	O75355	529 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PTP4A3	O75365	173 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CCNDBP1	O95273	360 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	RPN1	P04843	607 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZFY	P08048	801 aa	Predicted RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CYC1	P08574	325 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LAMP2	P13473	410 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PSMA4	P25789	261 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PPARG	P37231	505 aa	Predicted RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	RPL3	P39023	403 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MLH1	P40692	756 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	EIF2S3	P41091	472 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PI4KA	P42356	2102 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PSMD7	P51665	324 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MNAT1	P51948	309 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	F2RL1	P55085	397 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GOLGA8DP	Q0D2H9	430 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	OLIG2	Q13516	323 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NONO	Q15233	471 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SPDYC	Q5MJ68	293 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ITPRIPL1	Q6GPH6	555 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NEK10	Q6ZWH5	1172 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CCDC65	Q8IXS2	484 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CCDC89	Q8N998	374 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	BEST2	Q8NFU1	509 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ARHGEF2	Q92974	986 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FAM149B1	Q96BN6	582 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	VMP1	Q96GC9	406 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TXNDC15	Q96J42	360 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	C12orf42	Q96LP6	360 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	C1QTNF5	Q9BXJ0	243 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FAM107B	Q9H098	131 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MRPL44	Q9H9J2	332 aa	Known RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TBC1D22B	Q9NU19	505 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PAG1	Q9NWQ8	432 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	WDR37	Q9Y2I8	494 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PAM16	Q9Y3D7	125 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	EVPL	Q92817	2033 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZMYM6	O95789	1325 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CCDC168	Q8NDH2	2452 aa		4.95	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NOTCH1	P46531	2555 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278		A0A1W2PQF6	199 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TMEM202	A6NGA9	273 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LIPT2	A6NK58	231 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	BTBD18	B2RXH4	712 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PTGES3L	E9PB15	166 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	INO80B-WBP1	J3KQ70	363 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	P4HA2	O15460	535 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HSPA12A	O43301	675 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FRAT2	O75474	233 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SOX30	O94993	753 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NDUFB4	O95168	129 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PGK2	P07205	417 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ACADM	P11310	421 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MXI1	P50539	228 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278		Q0VFX4	171 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ST3GAL1	Q11201	340 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZBTB17	Q13105	803 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CUL4A	Q13619	759 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ACVR2B	Q13705	512 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MCMDC2	Q4G0Z9	681 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SFMBT2	Q5VUG0	894 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	KLHL35	Q6PF15	583 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CWC27	Q6UX04	472 aa	Known RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MTSS1L	Q765P7	747 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TLK2	Q86UE8	772 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZC3HC1	Q86WB0	502 aa	Known RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TTC39C	Q8N584	583 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	WDTC1	Q8N5D0	677 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	AADAT	Q8N5Z0	425 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SCCPDH	Q8NBX0	429 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	OR14A16	Q8NHC5	309 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	OR14L1P	Q8NHC6	308 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GOLGA5	Q8TBA6	731 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	RND1	Q92730	232 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LRRC45	Q96CN5	670 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	DTNBP1	Q96EV8	351 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CMTM3	Q96MX0	182 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SLITRK1	Q96PX8	696 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TCHP	Q9BT92	498 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	STRA6	Q9BX79	667 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	IDI2	Q9BXS1	227 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NACA2	Q9H009	215 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	KCNN2	Q9H2S1	579 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TMEM9B	Q9NQ34	198 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HCFC1R1	Q9NWW0	138 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms