RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	STN1	Q9H668	368 aa	Known RBP	11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	IMP3	Q9NV31	184 aa	Known RBP	11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	CD274	Q9NZQ7	290 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	COPG2	Q9UBF2	871 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	KLK13	Q9UKR3	277 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	PLAGL1	Q9UM63	463 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	ASF1A	Q9Y294	204 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	MSRB2	Q9Y3D2	182 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	OARD1	Q9Y530	152 aa		11.98	□□□□□ -0.49
PTPN7-205	ENST00000464870	KIR2DS5	A0A0G2JLQ3	304 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870		A0A0G2JNG1	304 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	FAM221B	A6H8Z2	402 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870		A6NCN8	305 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	LRRC14B	A6NHZ5	514 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870		A8MT66	165 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	KIR2DS3	K7RE56	304 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	IFRD1	O00458	451 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SLC16A5	O15375	505 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SMIM24	O75264	130 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	C1orf105	O95561	183 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	MT-CO3	P00414	261 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	CAT	P04040	527 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	F3	P13726	295 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	TAC1	P20366	129 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	CYP2A7	P20853	494 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	BGN	P21810	368 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	ATP5F1	P24539	256 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	AGTR2	P50052	363 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	INSM1	Q01101	510 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	GUCY1A3	Q02108	690 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	KIR2DS5	Q14953	304 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	TGFBI	Q15582	683 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	PFKFB4	Q16877	469 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	IYD	Q6PHW0	289 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	ABRAXAS1	Q6UWZ7	409 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SLC9B2	Q86UD5	537 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	NUDCD3	Q8IVD9	361 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	CACTIN-AS1	Q8N1I8	211 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SFRP1	Q8N474	314 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870		Q8N9G6	341 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	AVL9	Q8NBF6	648 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	ESAM	Q96AP7	390 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SH3KBP1	Q96B97	665 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	PKP4	Q99569	1192 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SYNDIG1	Q9H7V2	258 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	PARVB	Q9HBI1	364 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	CLCA2	Q9UQC9	943 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	TDRKH	Q9Y2W6	561 aa	Known RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	RNF215	Q9Y6U7	377 aa		11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	TP53BP1	Q12888	1972 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN7-205	ENST00000464870	SYCE1L	A8MT33	242 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	TAPBP	O15533	448 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	SIX3	O95343	332 aa	Predicted RBP	11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	TPBGL	P0DKB5	382 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	MTHFD1	P11586	935 aa	Known RBP	11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	NEFH	P12036	1026 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	GFAP	P14136	432 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	MAP4	P27816	1152 aa	Known RBP	11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	MDH1	P40925	334 aa	Known RBP	11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	SLC19A1	P41440	591 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	HAL	P42357	657 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	CLDN6	P56747	220 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	SP140	Q13342	867 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	SPIDR	Q14159	915 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	CES4A	Q5XG92	561 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	UNC5D	Q6UXZ4	953 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	WASH2P	Q6VEQ5	465 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	ZCCHC23	Q6ZST2	131 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	FBXO39	Q8N4B4	442 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	RDH11	Q8TC12	318 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	MCOLN3	Q8TDD5	553 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	SLC37A2	Q8TED4	501 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	DYDC1	Q8WWB3	177 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	JPH3	Q8WXH2	748 aa	Predicted RBP	11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	IL17F	Q96PD4	163 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	DEPDC7	Q96QD5	511 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	GFM1	Q96RP9	751 aa	Known RBP	11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	EGFL8	Q99944	293 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	HGH1	Q9BTY7	390 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	TRIM54	Q9BYV2	358 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	RDH14	Q9HBH5	336 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	WASH6P	Q9NQA3	447 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	OXSM	Q9NWU1	459 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	ARL15	Q9NXU5	204 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	NUDT4	Q9NZJ9	180 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	MID2	Q9UJV3	735 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	ASB1	Q9Y576	335 aa		11.96	□□□□□ -0.49
PTPN7-205	ENST00000464870	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.96	□□□□□ -0.5
PTPN7-205	ENST00000464870	ZFC3H1	O60293	1989 aa	Known RBP	11.96	□□□□□ -0.5
PTPN7-205	ENST00000464870	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	FAM149A	A5PLN7	773 aa		11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	PPM1D	O15297	605 aa		11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	BIRC5	O15392	142 aa		11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	KLK8	O60259	260 aa		11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	S100B	P04271	92 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	RPLP0	P05388	317 aa	Known RBP	11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	ENO2	P09104	434 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN7-205	ENST00000464870	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms