RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 AIMP2Q13155 320 aaKnown RBP15.07■□□□□ 0
SND1-203ENST00000463020 TFDP2Q14188 446 aa15.07■□□□□ 0
SND1-203ENST00000463020 DBN1Q16643 649 aa15.07■□□□□ 0
SND1-203ENST00000463020 CCDC50Q8IVM0 306 aa15.07■□□□□ 0
SND1-203ENST00000463020 METTL27Q8N6F8 245 aaPredicted RBP15.07■□□□□ 0
SND1-203ENST00000463020 DNAJB14Q8TBM8 379 aa15.07■□□□□ 0
SND1-203ENST00000463020 TM9SF4Q92544 642 aa15.07■□□□□ 0
SND1-203ENST00000463020 KRT35Q92764 455 aa15.07■□□□□ 0
SND1-203ENST00000463020 N4BP2L2Q92802 583 aaPredicted RBP15.07■□□□□ 0
SND1-203ENST00000463020 ULK4Q96C45 1275 aa15.07■□□□□ 0
SND1-203ENST00000463020 SLX1AQ9BQ83 275 aa15.07■□□□□ 0
SND1-203ENST00000463020 HEMGNQ9BXL5 484 aa15.07■□□□□ 0
SND1-203ENST00000463020 AP1M1Q9BXS5 423 aa15.07■□□□□ 0
SND1-203ENST00000463020 AGPAT4Q9NRZ5 378 aa15.07■□□□□ 0
SND1-203ENST00000463020 ZDHHC3Q9NYG2 299 aa15.07■□□□□ 0
SND1-203ENST00000463020 CTSFQ9UBX1 484 aa15.07■□□□□ 0
SND1-203ENST00000463020 CDC23Q9UJX2 597 aa15.07■□□□□ 0
SND1-203ENST00000463020 AP1M2Q9Y6Q5 423 aa15.07■□□□□ 0
SND1-203ENST00000463020 ANKRD12Q6UB98 2062 aa15.07■□□□□ 0
SND1-203ENST00000463020 C5orf60A6NFR6 353 aa15.06■□□□□ 0
SND1-203ENST00000463020 BHMG1C9JSJ3 638 aaPredicted RBP15.06■□□□□ 0
SND1-203ENST00000463020 SPOPO43791 374 aa15.06■□□□□ 0
SND1-203ENST00000463020 IPO13O94829 963 aaKnown RBP15.06■□□□□ 0
SND1-203ENST00000463020 KLHL18O94889 574 aa15.06■□□□□ 0
SND1-203ENST00000463020 EDN3P14138 238 aa15.06■□□□□ 0
SND1-203ENST00000463020 ITGALP20701 1170 aa15.06■□□□□ 0
SND1-203ENST00000463020 MMP11P24347 488 aa15.06■□□□□ 0
SND1-203ENST00000463020 GEMP55040 296 aa15.06■□□□□ 0
SND1-203ENST00000463020 CDC16Q13042 620 aa15.06■□□□□ 0
SND1-203ENST00000463020 ZNF169Q14929 603 aaPredicted RBP15.06■□□□□ 0
SND1-203ENST00000463020 NKG7Q16617 165 aa15.06■□□□□ 0
SND1-203ENST00000463020 TTLL10Q6ZVT0 673 aa15.06■□□□□ 0
SND1-203ENST00000463020 ZGRF1Q86YA3 2104 aa15.06■□□□□ 0
SND1-203ENST00000463020 SLC35F6Q8N357 371 aa15.06■□□□□ 0
SND1-203ENST00000463020 C2orf73Q8N5S3 287 aaPredicted RBP15.06■□□□□ 0
SND1-203ENST00000463020 LINC01555Q8NAE3 123 aa15.06■□□□□ 0
SND1-203ENST00000463020 VAT1Q99536 393 aa15.06■□□□□ 0
SND1-203ENST00000463020 SOX17Q9H6I2 414 aaPredicted RBP15.06■□□□□ 0
SND1-203ENST00000463020 LUC7LQ9NQ29 371 aaKnown RBP15.06■□□□□ 0
SND1-203ENST00000463020 TXLNGQ9NUQ3 528 aa15.06■□□□□ 0
SND1-203ENST00000463020 PIH1D1Q9NWS0 290 aaKnown RBP15.06■□□□□ 0
SND1-203ENST00000463020 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.06■□□□□ 0
SND1-203ENST00000463020 TRHDEQ9UKU6 1024 aa15.06■□□□□ 0
SND1-203ENST00000463020 TDRKHQ9Y2W6 561 aaKnown RBP15.06■□□□□ 0
SND1-203ENST00000463020 V9GYY5 206 aaPredicted RBP15.06■□□□□ 0
SND1-203ENST00000463020 CNTRLQ7Z7A1 2325 aa15.06■□□□□ 0
SND1-203ENST00000463020 OR51F1A6NGY5 319 aa15.05■□□□□ -0
SND1-203ENST00000463020 MAP3K7O43318 606 aa15.05■□□□□ -0
SND1-203ENST00000463020 AKR1B10O60218 316 aa15.05■□□□□ -0
SND1-203ENST00000463020 NRP2O60462 931 aa15.05■□□□□ -0
SND1-203ENST00000463020 WISP2O76076 250 aa15.05■□□□□ -0
SND1-203ENST00000463020 STSP08842 583 aa15.05■□□□□ -0
SND1-203ENST00000463020 RALBP11234 206 aa15.05■□□□□ -0
SND1-203ENST00000463020 MAGP20916 626 aa15.05■□□□□ -0
SND1-203ENST00000463020 ALAS2P22557 587 aa15.05■□□□□ -0
SND1-203ENST00000463020 SLC1A1P43005 524 aa15.05■□□□□ -0
SND1-203ENST00000463020 TDGF1P3P51864 188 aa15.05■□□□□ -0
SND1-203ENST00000463020 NAA30Q147X3 362 aaPredicted RBP15.05■□□□□ -0
SND1-203ENST00000463020 WHAMMP3Q1A5X7 153 aa15.05■□□□□ -0
SND1-203ENST00000463020 ERCC6LQ2NKX8 1250 aa15.05■□□□□ -0
SND1-203ENST00000463020 ODF2Q5BJF6 829 aa15.05■□□□□ -0
SND1-203ENST00000463020 TFDP3Q5H9I0 405 aa15.05■□□□□ -0
SND1-203ENST00000463020 ZNF324BQ6AW86 544 aaPredicted RBP15.05■□□□□ -0
SND1-203ENST00000463020 LINC00696Q6ZRV3 163 aa15.05■□□□□ -0
SND1-203ENST00000463020 BZW1Q7L1Q6 419 aaKnown RBP15.05■□□□□ -0
SND1-203ENST00000463020 RHOT2Q8IXI1 618 aa15.05■□□□□ -0
SND1-203ENST00000463020 CCDC110Q8TBZ0 833 aa15.05■□□□□ -0
SND1-203ENST00000463020 TAAR6Q96RI8 345 aa15.05■□□□□ -0
SND1-203ENST00000463020 C17orf62Q9BQA9 187 aa15.05■□□□□ -0
SND1-203ENST00000463020 MENTQ9BUN1 341 aa15.05■□□□□ -0
SND1-203ENST00000463020 CHRNA10Q9GZZ6 450 aa15.05■□□□□ -0
SND1-203ENST00000463020 IRAK4Q9NWZ3 460 aa15.05■□□□□ -0
SND1-203ENST00000463020 EURLQ9NYK6 297 aa15.05■□□□□ -0
SND1-203ENST00000463020 ASF1AQ9Y294 204 aa15.05■□□□□ -0
SND1-203ENST00000463020 CCDC168Q8NDH2 2452 aa15.04■□□□□ -0
SND1-203ENST00000463020 CFAP99D6REC4 459 aa15.04■□□□□ -0
SND1-203ENST00000463020 H7C0C1 242 aa15.04■□□□□ -0
SND1-203ENST00000463020 PSTPIP1O43586 416 aa15.04■□□□□ -0
SND1-203ENST00000463020 IGHEP01854 428 aa15.04■□□□□ -0
SND1-203ENST00000463020 TPH1P17752 444 aa15.04■□□□□ -0
SND1-203ENST00000463020 SHMT2P34897 504 aa15.04■□□□□ -0
SND1-203ENST00000463020 GRIA3P42263 894 aa15.04■□□□□ -0
SND1-203ENST00000463020 ATP5OP48047 213 aa15.04■□□□□ -0
SND1-203ENST00000463020 KIF5AQ12840 1032 aa15.04■□□□□ -0
SND1-203ENST00000463020 RPA4Q13156 261 aa15.04■□□□□ -0
SND1-203ENST00000463020 ANKRD20A2Q5SQ80 823 aa15.04■□□□□ -0
SND1-203ENST00000463020 ANKRD20A1Q5TYW2 823 aa15.04■□□□□ -0
SND1-203ENST00000463020 AGAP7PQ5VUJ5 663 aa15.04■□□□□ -0
SND1-203ENST00000463020 ANKRD20A3Q5VUR7 823 aa15.04■□□□□ -0
SND1-203ENST00000463020 FCRL6Q6DN72 434 aa15.04■□□□□ -0
SND1-203ENST00000463020 TLDC1Q6P9B6 456 aa15.04■□□□□ -0
SND1-203ENST00000463020 BBS12Q6ZW61 710 aa15.04■□□□□ -0
SND1-203ENST00000463020 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
SND1-203ENST00000463020 OVCH1Q7RTY7 1134 aa15.04■□□□□ -0
SND1-203ENST00000463020 TAX1BP1Q86VP1 789 aa15.04■□□□□ -0
SND1-203ENST00000463020 KATNAL2Q8IYT4 538 aa15.04■□□□□ -0
SND1-203ENST00000463020 OR11G2Q8NGC1 345 aa15.04■□□□□ -0
SND1-203ENST00000463020 ITLN2Q8WWU7 325 aaPredicted RBP15.04■□□□□ -0
SND1-203ENST00000463020 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.04■□□□□ -0
SND1-203ENST00000463020 THOC3Q96J01 351 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms