RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 UBE2HP62256 183 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 SRSF11Q05519 484 aaKnown RBP7.39□□□□□ -1.23
SMC3-202ENST00000462899 CACNG1Q06432 222 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 ITGA9Q13797 1035 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 BOP1Q14137 746 aaKnown RBP7.39□□□□□ -1.23
SMC3-202ENST00000462899 PCSK7Q16549 785 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 C3AR1Q16581 482 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 LONRF1Q17RB8 773 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 LONRF2Q1L5Z9 754 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 RNFT1Q5M7Z0 435 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 KDELC1Q6UW63 502 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 LINC00696Q6ZRV3 163 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 TRIM73Q86UV7 250 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 AMIGO1Q86WK6 493 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 ANKRD20A12PQ8NF67 263 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 DNAJB8Q8NHS0 232 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 HM13Q8TCT9 377 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC3-202ENST00000462899 TRIM11Q96F44 468 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 ZNF285Q96NJ3 590 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 CCM2Q9BSQ5 444 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 NDC1Q9BTX1 674 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 RNF32Q9H0A6 362 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 SPHK1Q9NYA1 384 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 AIPL1Q9NZN9 384 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 MYO1AQ9UBC5 1043 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 CTSFQ9UBX1 484 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 TINAGQ9UJW2 476 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 CDC23Q9UJX2 597 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 MRPS2Q9Y399 296 aaKnown RBP7.39□□□□□ -1.23
SMC3-202ENST00000462899 NEU2Q9Y3R4 380 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 MXRA5Q9NR99 2828 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 ATRQ13535 2644 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 DNAJC13O75165 2243 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 RTTNQ86VV8 2226 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 A0A0J9YY10 115 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 A0A1B0GX78 115 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 PRAMEF1O95521 474 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 COX6A1P12074 109 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 CD99P14209 185 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 CD151P48509 253 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 ART1P52961 327 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 TAS2R40P59535 323 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 CSNK1G2P78368 415 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 XIAPP98170 497 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 PDK2Q15119 407 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 SIRPB2Q5JXA9 342 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 ATG9BQ674R7 924 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 SLC9A4Q6AI14 798 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 SARM1Q6SZW1 724 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 NCCRP1Q6ZVX7 275 aaPredicted RBP7.38□□□□□ -1.23
SMC3-202ENST00000462899 DET1Q7L5Y6 550 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 CEP97Q8IW35 865 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 CHERPQ8IWX8 916 aaKnown RBP7.38□□□□□ -1.23
SMC3-202ENST00000462899 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.38□□□□□ -1.23
SMC3-202ENST00000462899 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
SMC3-202ENST00000462899 MAGEB10Q96LZ2 347 aaPredicted RBP7.38□□□□□ -1.23
SMC3-202ENST00000462899 DEF6Q9H4E7 631 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 XKR8Q9H6D3 395 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 MVB12BQ9H7P6 319 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 COG4Q9H9E3 785 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 GLOD4Q9HC38 313 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 SEMA3GQ9NS98 782 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 TXLNGQ9NUQ3 528 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 FANCLQ9NW38 375 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 PLA2G3Q9NZ20 509 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 SEC14L3Q9UDX4 400 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 IP6K2Q9UHH9 426 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 SH3BGRL2Q9UJC5 107 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 ANAPC7Q9UJX3 599 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 NXT1Q9UKK6 140 aaKnown RBP7.38□□□□□ -1.23
SMC3-202ENST00000462899 MEMO1Q9Y316 297 aa7.38□□□□□ -1.23
SMC3-202ENST00000462899 TLN2Q9Y4G6 2542 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 IGLV3-16A0A075B6K0 115 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 IGLV3-12A0A075B6K2 115 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 FITM1A5D6W6 292 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 C3orf70A6NLC5 250 aaPredicted RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 ZNF487B1APH4 448 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 ADAM10O14672 748 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 DSCR3O14972 297 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 PMPCBO75439 489 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 USP1O94782 785 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 ZRANB2O95218 330 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMC3-202ENST00000462899 RASAL1O95294 804 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 MED26O95402 600 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 NADKO95544 446 aaPredicted RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 EPOP01588 193 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 CRYABP02511 175 aaKnown RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 CYP1A2P05177 515 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 POLBP06746 335 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 CHRM5P08912 532 aaPredicted RBP7.37□□□□□ -1.23
SMC3-202ENST00000462899 PRR35P0CG20 571 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 MSH3P20585 1137 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 PTPN3P26045 913 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 PDHA2P29803 388 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 AKT1P31749 480 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 CHRNA4P43681 627 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 SMSP52788 366 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 ARG2P78540 354 aa7.37□□□□□ -1.23
SMC3-202ENST00000462899 UBXN1Q04323 297 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms