RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ANKRD11Q6UB99 2663 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 A0A087X1B8 175 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 IQANK1A0A1B0GTG1 560 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 PIPSLA2A3N6 862 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 PABPN1LA6NDY0 278 aaKnown RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 BTN3A3O00478 584 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 BTN3A1O00481 513 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 HGSO14964 777 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 ANKRD34CP0C6C1 535 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 CCDC166P0CW27 439 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 POLR2CP19387 275 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 GCAP28676 217 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 TYK2P29597 1187 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 CSRP3P50461 194 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 ATP6V0D1P61421 351 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 EIF3IQ13347 325 aaKnown RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 KIR2DS3Q14952 304 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 CCSMST1Q4G0I0 132 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 TAF1BQ53T94 588 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 PHF19Q5T6S3 580 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 ANKS6Q68DC2 871 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 TBC1D1Q86TI0 1168 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 ANKRD49Q8WVL7 239 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 ISL2Q96A47 359 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 SLC22A18Q96BI1 424 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 CCDC74BQ96LY2 380 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 CCDC138Q96M89 665 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 TGM7Q96PF1 710 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 TWSG1Q9GZX9 223 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 SNX15Q9NRS6 342 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 AKAP7Q9P0M2 348 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 TMEM9Q9P0T7 183 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 PSMC3IPQ9P2W1 217 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 ADAMTS6Q9UKP5 1117 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 PLAGL1Q9UM63 463 aa21.75■■□□□ 1.07
C9orf3-209ENST00000460573 COL27A1Q8IZC6 1860 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-209ENST00000460573 GSAPA4D1B5 854 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 ERLIN1O75477 346 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 ALDOAP04075 364 aaKnown RBP21.74■■□□□ 1.07
C9orf3-209ENST00000460573 CHRM5P08912 532 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-209ENST00000460573 NUDT17P0C025 328 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 SLC35E2BP0CK96 405 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 GFERP55789 205 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 AP1S2P56377 157 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 RTP5Q14D33 572 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 CYP2A13Q16696 494 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 PRSS42Q7Z5A4 293 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 ARHGAP22Q7Z5H3 698 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 CMC1Q7Z7K0 106 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 B3GNT8Q7Z7M8 397 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 ADAMTSL2Q86TH1 951 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 SPNS2Q8IVW8 549 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 MYRIPQ8NFW9 859 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 PKP4Q99569 1192 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 SEMA5BQ9P283 1151 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 CTNNAL1Q9UBT7 734 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 POMT2Q9UKY4 750 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 PDE10AQ9Y233 779 aa21.74■■□□□ 1.07
C9orf3-209ENST00000460573 WDFY3Q8IZQ1 3526 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 CCDC187A0A096LP49 1063 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 CCDC189A1A4V9 331 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 TLCD2A6NGC4 264 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 EIF4E1BA6NMX2 242 aaKnown RBP21.73■■□□□ 1.07
C9orf3-209ENST00000460573 BRINP1O60477 761 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 SYF2O95926 243 aaKnown RBP21.73■■□□□ 1.07
C9orf3-209ENST00000460573 C2P06681 752 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 ERGP11308 486 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 RASA2Q15283 850 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 TIFABQ6ZNK6 161 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 TDRPQ86YL5 185 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 DLG3Q92796 817 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 CMKLR1Q99788 373 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 NMRAL1Q9HBL8 299 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 ACTR10Q9NZ32 417 aa21.73■■□□□ 1.07
C9orf3-209ENST00000460573 A0A096LPK6 155 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 TRIM49D1C9J1S8 452 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 FKBP9O95302 570 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 SHBGP04278 402 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 MPOP05164 745 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 LTA4HP09960 611 aaKnown RBP21.72■■□□□ 1.07
C9orf3-209ENST00000460573 CD1DP15813 335 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 MPSTP25325 297 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 PRDX3P30048 256 aaKnown RBP21.72■■□□□ 1.07
C9orf3-209ENST00000460573 MAGEA12P43365 314 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 CSHL1Q14406 222 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 SNAP47Q5SQN1 464 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 CACHD1Q5VU97 1274 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 SBSNQ6UWP8 590 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 KMT5CQ86Y97 462 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 LINC01555Q8NAE3 123 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 AGBL5Q8NDL9 886 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 WDR36Q8NI36 951 aaKnown RBP21.72■■□□□ 1.07
C9orf3-209ENST00000460573 DENND1AQ8TEH3 1009 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 SMPDL3AQ92484 453 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 CABS1Q96KC9 395 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 IL17FQ96PD4 163 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 NRTNQ99748 197 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 C1GALT1Q9NS00 363 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 KLHL3Q9UH77 587 aa21.72■■□□□ 1.07
C9orf3-209ENST00000460573 CIDEBQ9UHD4 219 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms