RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 UBE2J1Q9Y385 318 aaPredicted RBP3.95□□□□□ -1.78
UBDP1-202ENST00000457888 SNX10Q9Y5X0 201 aa3.95□□□□□ -1.78
UBDP1-202ENST00000457888 KNL1Q8NG31 2342 aa3.95□□□□□ -1.78
UBDP1-202ENST00000457888 SPTBN4Q9H254 2564 aa3.95□□□□□ -1.78
UBDP1-202ENST00000457888 CACNA1HO95180 2353 aa3.95□□□□□ -1.78
UBDP1-202ENST00000457888 CLUHO75153 1309 aa3.95□□□□□ -1.78
UBDP1-202ENST00000457888 DOCK4Q8N1I0 1966 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 KIF26AQ9ULI4 1882 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 SDK1Q7Z5N4 2213 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 DMXL1Q9Y485 3027 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 LY6G6EA0A0G2JKS1 128 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 GOLGA6L7A0A1B0GV03 622 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM90A8PA6NJQ4 464 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 CD8B2A6NJW9 211 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 HEPACAM2A8MVW5 462 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM72CH0Y354 149 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 NKX2-8O15522 239 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 MSI1O43347 362 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RTN2O75298 545 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RNASEH2AO75792 299 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RTN3O95197 1032 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 LSM8O95777 96 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 NPSP0C0P6 89 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM90A13PP0C7W8 464 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM90A24PP0C7X0 464 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 CHN1P15882 459 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ATP5F1P24539 256 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ABCD3P28288 659 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 AVPR2P30518 371 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 GGT5P36269 586 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 CASP2P42575 452 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 MTHFRP42898 656 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 SGSHP51688 502 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ARSEP51690 589 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 HDAC4P56524 1084 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 YWHAGP61981 247 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 YWHAZP63104 245 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 GPC5P78333 572 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FCHO2Q0JRZ9 810 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 LMAN2Q12907 356 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 TOMM20Q15388 145 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RBMS2Q15434 407 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ZNF77Q15935 545 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 CA9Q16790 459 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM133BQ5BKY9 247 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RNASE12Q5GAN4 147 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 CCDC122Q5T0U0 273 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM182AQ5T1J6 154 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 HECTD3Q5T447 861 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 LIN9Q5TKA1 542 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM72AQ5TYM5 149 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 NADSYN1Q6IA69 706 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 OR6B2Q6IFH4 312 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM72DQ6L9T8 149 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ACSM6Q6P461 480 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RHBDF2Q6PJF5 856 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 H1FNTQ75WM6 255 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 SLC26A9Q7LBE3 791 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ARCQ7LC44 396 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM72BQ86X60 149 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 MFSD6LQ8IWD5 586 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ADHFE1Q8IWW8 467 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FAM217AQ8IXS0 508 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 TMEM35BQ8NCS4 154 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ABHD11Q8NFV4 315 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 DQX1Q8TE96 717 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RXFP2Q8WXD0 754 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RFFLQ8WZ73 363 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 IRGQQ8WZA9 623 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 SMARCD2Q92925 531 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 FBXO32Q969P5 355 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ARRDC3Q96B67 414 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RNF125Q96EQ8 232 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 PGAP3Q96FM1 320 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ZFYVE19Q96K21 471 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RITA1Q96K30 269 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 RPGRIP1Q96KN7 1286 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 LMLNQ96KR4 655 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 PEBP4Q96S96 227 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 PRMT1Q99873 361 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 MACROD1Q9BQ69 325 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 C11orf70Q9BRQ4 267 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 THAP7Q9BT49 309 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ANP32EQ9BTT0 268 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 GOLPH3Q9H4A6 298 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 EPHX3Q9H6B9 360 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 LRRC4Q9HBW1 653 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 SNX15Q9NRS6 342 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 IRAK4Q9NWZ3 460 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 GDE1Q9NZC3 331 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ADAM22Q9P0K1 906 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 TRIM10Q9UDY6 481 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 PROCRQ9UNN8 238 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 NEU3Q9UQ49 428 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 MTF2Q9Y483 593 aaPredicted RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 BZW2Q9Y6E2 419 aaKnown RBP3.94□□□□□ -1.78
UBDP1-202ENST00000457888 ZNF292O60281 2723 aa3.94□□□□□ -1.78
UBDP1-202ENST00000457888 CHD5Q8TDI0 1954 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms