RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC30A3Q99726 388 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 ULBP3Q9BZM4 244 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 DPH5Q9H2P9 285 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 FGF21Q9NSA1 209 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 SOHLH2Q9NX45 425 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 SPHK1Q9NYA1 384 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 RARRES3Q9UL19 164 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 DHRS7Q9Y394 339 aa16.76■□□□□ 0.27
USP39-208ENST00000455732 LOC101059948A0A1B0GTJ6 334 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 PSIP1O75475 530 aaKnown RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 SPAG6O75602 509 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 URI1O94763 535 aaPredicted RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 ITGB2P05107 769 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 CBSLP0DN79 551 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 ST6GAL1P15907 406 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 CD9P21926 228 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 GABRB3P28472 473 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 CBSP35520 551 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 ABHD18Q0P651 414 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 SLC5A12Q1EHB4 618 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 LINC00303Q3SY05 128 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 HP1BP3Q5SSJ5 553 aaPredicted RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 TRMT10BQ6PF06 316 aaKnown RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 RASGRP3Q8IV61 690 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 ESX1Q8N693 406 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 HMGCLL1Q8TB92 370 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 CD200R1Q8TD46 325 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 INPP5DQ92835 1189 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 SLC22A18Q96BI1 424 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 SEMA4CQ9C0C4 833 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 SPATA7Q9P0W8 599 aa16.75■□□□□ 0.27
USP39-208ENST00000455732 CORO1CQ9ULV4 474 aaPredicted RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 RUVBL2Q9Y230 463 aaKnown RBP16.75■□□□□ 0.27
USP39-208ENST00000455732 A0A0J9YY10 115 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 VPS26AO75436 327 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 FKBP9O95302 570 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 MPC1LP0DKB6 136 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 STAT5AP42229 794 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 BDKRB1P46663 353 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 CARSP49589 748 aaKnown RBP16.74■□□□□ 0.27
USP39-208ENST00000455732 CYP4F2P78329 520 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 CAV1Q03135 178 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 LY6DQ14210 128 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 KLHL38Q2WGJ6 581 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 ANKMY2Q8IV38 441 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 ZBED8Q8IZ13 594 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 ZNF843Q8N446 348 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 RAB42Q8N4Z0 105 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 C19orf47Q8N9M1 422 aaKnown RBP16.74■□□□□ 0.27
USP39-208ENST00000455732 FBXO15Q8NCQ5 510 aaPredicted RBP16.74■□□□□ 0.27
USP39-208ENST00000455732 ZNF501Q96CX3 271 aaPredicted RBP16.74■□□□□ 0.27
USP39-208ENST00000455732 ELMO2Q96JJ3 720 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 SLC45A3Q96JT2 553 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 GPR21Q99679 349 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 FANCEQ9HB96 536 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 PPANQ9NQ55 473 aaKnown RBP16.74■□□□□ 0.27
USP39-208ENST00000455732 FAM114A2Q9NRY5 505 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 MOCS1Q9NZB8 636 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 SLC39A10Q9ULF5 831 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 ZNF462Q96JM2 2506 aa16.74■□□□□ 0.27
USP39-208ENST00000455732 ARHGEF33A8MVX0 844 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 MYO1CO00159 1063 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 MAP3K7O43318 606 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 TIAF1O95411 115 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 AHSGP02765 367 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 CATP04040 527 aaKnown RBP16.73■□□□□ 0.27
USP39-208ENST00000455732 ERGP11308 486 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 PVRP15151 417 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 SKIV2L2P42285 1042 aaKnown RBP16.73■□□□□ 0.27
USP39-208ENST00000455732 TIAL1Q01085 375 aaKnown RBP eCLIP16.73■□□□□ 0.27
USP39-208ENST00000455732 MGAT5Q09328 741 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 GPR19Q15760 415 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 CYP2A13Q16696 494 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.73■□□□□ 0.27
USP39-208ENST00000455732 LRRC8EQ6NSJ5 796 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 PWWP2BQ6NUJ5 590 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 UGT3A1Q6NUS8 523 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 TRIM73Q86UV7 250 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 DENND1AQ8TEH3 1009 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 SEC14L1Q92503 715 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 EXTL1Q92935 676 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
USP39-208ENST00000455732 RNF31Q96EP0 1072 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 TCTN2Q96GX1 697 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 IL17FQ96PD4 163 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 NDNQ99608 321 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 GPN2Q9H9Y4 310 aaPredicted RBP16.73■□□□□ 0.27
USP39-208ENST00000455732 TAS2R13Q9NYV9 303 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 SLC17A6Q9P2U8 582 aa16.73■□□□□ 0.27
USP39-208ENST00000455732 TRMT6Q9UJA5 497 aaKnown RBP16.73■□□□□ 0.27
USP39-208ENST00000455732 ISM1B1AKI9 464 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 PRICKLE3O43900 615 aaPredicted RBP16.72■□□□□ 0.27
USP39-208ENST00000455732 MT-ND3P03897 115 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 PLA2G2AP14555 144 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 CUL1Q13616 776 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 ARHGAP19Q14CB8 494 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 CCSMST1Q4G0I0 132 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 RBM20Q5T481 1227 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms