RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 CD84Q9UIB8 345 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 INSL6Q9Y581 213 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 CLGNO14967 610 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 SGTAO43765 313 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 SLCO2B1O94956 709 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 SCELO95171 688 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 FTH1P02794 183 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 TCF3P15923 654 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 MAPK1P28482 360 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 CAPGP40121 348 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 HNRNPFP52597 415 aaKnown RBP14.69□□□□□ -0.06
LDLR-202ENST00000455727 LRRC73Q5JTD7 316 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 LY6G5CQ5SRR4 150 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 TMEM215Q68D42 235 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 NEK5Q6P3R8 708 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 HCAR2Q8TDS4 363 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 ADAMTS16Q8TE57 1224 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 TESCQ96BS2 214 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 NMD3Q96D46 503 aaKnown RBP14.69□□□□□ -0.06
LDLR-202ENST00000455727 MTFMTQ96DP5 389 aaKnown RBP14.69□□□□□ -0.06
LDLR-202ENST00000455727 MRGPRX3Q96LB0 322 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 NTN4Q9HB63 628 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 IL23AQ9NPF7 189 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 DNAJC11Q9NVH1 559 aa14.69□□□□□ -0.06
LDLR-202ENST00000455727 ELOVL7A1L3X0 281 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 HIDE1A8MVS5 230 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 UPK3BL1B0FP48 263 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 UPK3BL2E5RIL1 263 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 H0YAE9 185 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 AREL1O15033 823 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 UGDHO60701 494 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 HOXB6P17509 224 aaKnown RBP14.68□□□□□ -0.06
LDLR-202ENST00000455727 NNMTP40261 264 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 PLIN5Q00G26 463 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 CYBRD1Q53TN4 286 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 HENMT1Q5T8I9 393 aaKnown RBP14.68□□□□□ -0.06
LDLR-202ENST00000455727 TTC33Q6PID6 262 aaPredicted RBP14.68□□□□□ -0.06
LDLR-202ENST00000455727 OR10A6Q8NH74 314 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 FBXL8Q96CD0 374 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 LRIG1Q96JA1 1093 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 VPS50Q96JG6 964 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 HHIPQ96QV1 700 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 ZSCAN5AQ9BUG6 496 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 PAIP1Q9H074 479 aaKnown RBP14.68□□□□□ -0.06
LDLR-202ENST00000455727 DKK3Q9UBP4 350 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 DLGAP4Q9Y2H0 992 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 FADS3Q9Y5Q0 445 aa14.68□□□□□ -0.06
LDLR-202ENST00000455727 A0A087WXM4 84 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 A0A096LPI6 279 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 UPK1AO00322 258 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 GSTA4O15217 222 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 LEFTY1O75610 366 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 RHOP08100 348 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 TIMP2P16035 220 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 HOXA9P31269 272 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.67□□□□□ -0.06
LDLR-202ENST00000455727 PYCR3Q53H96 274 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 SERPINA13PQ6UXR4 307 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 MSANTD1Q6ZTZ1 278 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 Q6ZVL8 140 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 USP51Q70EK9 711 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 PATL1Q86TB9 770 aaKnown RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 BEND7Q8N7W2 519 aaPredicted RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 MAGEE2Q8TD90 523 aaPredicted RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 ELMO1Q92556 727 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 SCAMP4Q969E2 229 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 PAWRQ96IZ0 340 aaKnown RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 BEGAINQ9BUH8 593 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 YTHDF1Q9BYJ9 559 aaKnown RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 IKZF5Q9H5V7 419 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 KAT8Q9H7Z6 458 aaKnown RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 RMND5AQ9H871 391 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 PCDH12Q9NPG4 1184 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 SLC22A14Q9Y267 594 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 CEPT1Q9Y6K0 416 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 RFPL2O75678 378 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 IL1RNP18510 177 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 NELFEP18615 380 aaKnown RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 S100A3P33764 101 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 PHC1P78364 1004 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 ADARB1P78563 741 aaKnown RBP14.67□□□□□ -0.06
LDLR-202ENST00000455727 ARSIQ5FYB1 569 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 LIPJQ5W064 366 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 FRG2Q64ET8 278 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 NECAB2Q7Z6G3 386 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 CALHM3Q86XJ0 350 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 ITCHQ96J02 903 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 FCRL1Q96LA6 429 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 FRG2BQ96QU4 278 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 SERHLQ9NQF3 203 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 ADGRE2Q9UHX3 823 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 INVSQ9Y283 1065 aa14.67□□□□□ -0.06
LDLR-202ENST00000455727 MT-ND1P03886 318 aa14.66□□□□□ -0.06
LDLR-202ENST00000455727 RETP07949 1114 aa14.66□□□□□ -0.06
LDLR-202ENST00000455727 GSTM1P09488 218 aa14.66□□□□□ -0.06
LDLR-202ENST00000455727 JUPP14923 745 aa14.66□□□□□ -0.06
LDLR-202ENST00000455727 HOXB9P17482 250 aaPredicted RBP14.66□□□□□ -0.06
LDLR-202ENST00000455727 CDH2P19022 906 aaPredicted RBP14.66□□□□□ -0.06
LDLR-202ENST00000455727 NRIP1P48552 1158 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms