RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 DXOO77932 396 aaKnown RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 EPN2O95208 641 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 CATP04040 527 aaKnown RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 EPORP19235 508 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 CYP2A7P20853 494 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 PRDX3P30048 256 aaKnown RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 BLKP51451 505 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 ALDH18A1P54886 795 aaKnown RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 MAZP56270 477 aaKnown RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 DNAJB13P59910 316 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 PLOD1Q02809 727 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 SP140Q13342 867 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 TEAD4Q15561 434 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 DUOXA1Q1HG43 343 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 ZNF423Q2M1K9 1284 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 TRIM61Q5EBN2 209 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 PRAMEF9Q5VWM5 478 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 CGB2Q6NT52 195 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 UNC5DQ6UXZ4 953 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 ZNF761Q86XN6 746 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 LRRC34Q8IZ02 419 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 LINC01555Q8NAE3 123 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 SUMF1Q8NBK3 374 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 FBXO15Q8NCQ5 510 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 OR9A1PQ8NGU1 263 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 SLC37A2Q8TED4 501 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 L3HYPDHQ96EM0 354 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 FOPNLQ96NB1 174 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 CCDC134Q9H6E4 229 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 ERVMER34-1Q9H9K5 563 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 INTS7Q9NVH2 962 aaKnown RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 FAM86C1Q9NVL1 165 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-205ENST00000454569 ZNF225Q9UK10 706 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 PCTPQ9UKL6 214 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
SCN9A-205ENST00000454569 CCDC189A1A4V9 331 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SYCE1LA8MT33 242 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SNNO75324 88 aaPredicted RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SUPT7LO94864 414 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 RPS17P08708 135 aaKnown RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ANXA5P08758 320 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 NEFHP12036 1026 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 GGT5P36269 586 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 MPLP40238 635 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SLC6A12P48065 614 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 RXRGP48443 463 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 HNRNPKP61978 463 aaKnown RBP eCLIP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 HERVK_113P63132 956 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 UBE2IP63279 158 aaKnown RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 CDKL1Q00532 357 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 OCRLQ01968 901 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 STX3Q13277 289 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 PTCHD3Q3KNS1 767 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SULT1C3Q6IMI6 304 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SLC23A3Q6PIS1 610 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ZC3H14Q6PJT7 736 aaKnown RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 AGTRAPQ6RW13 159 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SUSD1Q6UWL2 747 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 THSD4Q6ZMP0 1018 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 TBC1D21Q8IYX1 336 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 DCBLD1Q8N8Z6 715 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 OR52E1Q8NGJ3 308 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ZDHHC1Q8WTX9 485 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 FBXL8Q96CD0 374 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 THOC1Q96FV9 657 aaKnown RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 OR4K3Q96R72 315 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ERVK-6Q9BXR3 956 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 CD244Q9BZW8 370 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 GAREM1Q9H706 876 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SEMA4BQ9NPR2 832 aaPredicted RBP10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ABCF3Q9NUQ8 709 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SPASTQ9UBP0 616 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 SUSD2Q9UGT4 822 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 ICKQ9UPZ9 632 aa10.65□□□□□ -0.7
SCN9A-205ENST00000454569 A0A1B0GTQ1 180 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 A0A1W2PPV9 198 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SRRM3A6NNA2 597 aaPredicted RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 E7ENX8 843 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 LMO7DNF2Z398 122 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 STX16-NPEPL1H3BU86 382 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 OR7A17O14581 309 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 STX16O14662 325 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 PPM1DO15297 605 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 CCNT2O60583 730 aaKnown RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SERPINE1P05121 402 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 HIST1H2AGP0C0S8 130 aaPredicted RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 XRCC1P18887 633 aaPredicted RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 HIST1H2ADP20671 130 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 MAP4P27816 1152 aaKnown RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SLC1A6P48664 564 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 MMP16P51512 607 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 ABCE1P61221 599 aaKnown RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 TAP2Q03519 686 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 NAE1Q13564 534 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 PCBP2Q15366 365 aaKnown RBP eCLIP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 ELOCQ15369 112 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 ARL13AQ5H913 290 aaPredicted RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 PLA2G2CQ5R387 149 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms