RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 TRIM4Q9C037 500 aa16.46■□□□□ 0.23
TNFRSF4-202ENST00000453580 INTS10Q9NVR2 710 aaKnown RBP16.46■□□□□ 0.23
TNFRSF4-202ENST00000453580 SYBUQ9NX95 663 aa16.46■□□□□ 0.23
TNFRSF4-202ENST00000453580 SPHK1Q9NYA1 384 aa16.46■□□□□ 0.23
TNFRSF4-202ENST00000453580 FAM237BA0A1B0GVD1 139 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 SDR42E2A6NKP2 422 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 ZNF839A8K0R7 811 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 IQCF5A8MTL0 148 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 TARM1B6A8C7 271 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 E5RI56 91 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 PGRMC1O00264 195 aaKnown RBP16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 TMEM63AO94886 807 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 TPBGLP0DKB5 382 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 IL10RAQ13651 578 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 THOC5Q13769 683 aaKnown RBP16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 SSPNQ14714 243 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 PRAMEF17Q5VTA0 474 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 CCDC137Q6PK04 289 aaKnown RBP16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 FAM198BQ6UWH4 519 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 TMEM135Q86UB9 458 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 TRIM73Q86UV7 250 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 VRK3Q8IV63 474 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 KRT222Q8N1A0 295 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 DNAJC22Q8N4W6 341 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 FLVCR1-AS1Q8TAF5 88 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 HMGCLL1Q8TB92 370 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 CALML6Q8TD86 181 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 ADAMTS17Q8TE56 1095 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 NACC2Q96BF6 587 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 VPS50Q96JG6 964 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 EPN3Q9H201 632 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 CCDC68Q9H2F9 335 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 FAM60AQ9NP50 221 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 FAM114A2Q9NRY5 505 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 EURLQ9NYK6 297 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 IL1RAPL1Q9NZN1 696 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 SPATA7Q9P0W8 599 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 PLAGL1Q9UM63 463 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 ZNF451Q9Y4E5 1061 aa16.45■□□□□ 0.22
TNFRSF4-202ENST00000453580 ARGFXA6NJG6 315 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 PEX12O00623 359 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 CHRM3P20309 590 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 VARSP26640 1264 aaKnown RBP16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 HSD17B2P37059 387 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 FOLR3P41439 243 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 GABRA4P48169 554 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 VPS41P49754 854 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 CYP1B1Q16678 543 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 FAM214AQ32MH5 1076 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 PTCHD3Q3KNS1 767 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 TTLL9Q3SXZ7 439 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 NEPROQ6NW34 567 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 MICALCLQ6ZW33 695 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 ATCAYQ86WG3 371 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 TTC29Q8NA56 475 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 LPGAT1Q92604 370 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 FER1L6-AS2Q96M78 137 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 RUFY1Q96T51 708 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 UTP6Q9NYH9 597 aaKnown RBP16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 IFT80Q9P2H3 777 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 KLHL42Q9P2K6 505 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 COMMD10Q9Y6G5 202 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 FAM169AQ9Y6X4 670 aa16.44■□□□□ 0.22
TNFRSF4-202ENST00000453580 SNRNP200O75643 2136 aaKnown RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 CES2O00748 559 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 KIF5CO60282 957 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 SRPX2O60687 465 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 PHF2O75151 1096 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 C1orf105O95561 183 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 CAPN1P07384 714 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 MAGP20916 626 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 FMO4P31512 558 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 COILP38432 576 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 PTGIRP43119 386 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 FNTAP49354 379 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 CCL11P51671 97 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 DHX34Q14147 1143 aaKnown RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 GRM7Q14831 915 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 TRIP13Q15645 432 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 ZIC1Q15915 447 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 ANKRD20A4Q4UJ75 823 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 MLIPQ5VWP3 458 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 PAPD7Q5XG87 772 aaKnown RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 ZNF385CQ66K41 422 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 FIGLAQ6QHK4 219 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 CILP2Q8IUL8 1156 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 MCATQ8IVS2 390 aaKnown RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 ZNF655Q8N720 491 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 LMNTD1Q8N9Z9 388 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 LINC01555Q8NAE3 123 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 LKAAEAR1Q8TD35 194 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 ACTRT1Q8TDG2 376 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 PTERQ96BW5 349 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 BIRC8Q96P09 236 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 NRTNQ99748 197 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 MENTQ9BUN1 341 aa16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 SPRTNQ9H040 489 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF4-202ENST00000453580 PCM1Q15154 2024 aa16.42■□□□□ 0.22
TNFRSF4-202ENST00000453580 CTAGE9A4FU28 777 aa16.42■□□□□ 0.22
TNFRSF4-202ENST00000453580 H3BMH7 237 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms