RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-223	ENST00000452489	MICAL3	Q7RTP6	2002 aa		18.24	■□□□□ 0.51
PTPA-223	ENST00000452489	DICER1	Q9UPY3	1922 aa	Known RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	MYO1G	B0I1T2	1018 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	CXCR6	O00574	342 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	SCAMP3	O14828	347 aa	Known RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	CRCP	O75575	148 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	KEL	P23276	732 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	OR52H1	Q8NGJ2	320 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	ENKUR	Q8TC29	256 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	NDRG1	Q92597	394 aa	Known RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	MRGPRX2	Q96LB1	330 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	C12orf42	Q96LP6	360 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	TSEN34	Q9BSV6	310 aa	Known RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	THUMPD3	Q9BV44	507 aa	Known RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	COA1	Q9GZY4	146 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	OGDHL	Q9ULD0	1010 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	ERVW-1	Q9UQF0	538 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489		A0A075B6Q4	140 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	EFCAB10	A6NFE3	127 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	FAM72C	H0Y354	149 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	ZNF623	O75123	536 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	MLYCD	O95822	493 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	VIP	P01282	170 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	CSF3	P09919	207 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	PRR35	P0CG20	571 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	NUDT6	P53370	316 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	GRM7	Q14831	915 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	CYP27C1	Q4G0S4	372 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	FAM72A	Q5TYM5	149 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	KDM4D	Q6B0I6	523 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	FAM72D	Q6L9T8	149 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489		Q6ZPB1	254 aa	Predicted RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	CCDC149	Q6ZUS6	474 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	FAM72B	Q86X60	149 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	FAM126B	Q8IXS8	530 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	DPP10	Q8N608	796 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	NPW	Q8N729	165 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	BRINP2	Q9C0B6	783 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	IFT22	Q9H7X7	185 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	JPH1	Q9HDC5	661 aa	Predicted RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	QSER1	Q2KHR3	1735 aa		18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	COL14A1	Q05707	1796 aa	Known RBP	18.23	■□□□□ 0.51
PTPA-223	ENST00000452489	WASHC1	A8K0Z3	465 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	PLA2G10	O15496	165 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	WDR47	O94967	919 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	DIRAS1	O95057	198 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	MT-CYB	P00156	380 aa	Predicted RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	CD72	P21854	359 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	CPN2	P22792	545 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	DNAJB2	P25686	324 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	PRDX3	P30048	256 aa	Known RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	MAP2K6	P52564	334 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	HSPA2	P54652	639 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	CDKN2D	P55273	166 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	VEPH1	Q14D04	833 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	HECTD2	Q5U5R9	776 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	SAXO2	Q658L1	398 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	ACOT1	Q86TX2	421 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	LDB1	Q86U70	411 aa	Predicted RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	P3H2	Q8IVL5	708 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	SLC35F5	Q8WV83	523 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	C3orf14	Q9HBI5	128 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	POLM	Q9NP87	494 aa	Predicted RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	DCLK1	O15075	740 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	SERPINA1	P01009	418 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	NPPA	P01160	153 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	JCHAIN	P01591	159 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	STS	P08842	583 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	RPP38	P78345	283 aa	Known RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	PRKG2	Q13237	762 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	GRIK4	Q16099	956 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	KIAA1614	Q5VZ46	1190 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	ABHD15	Q6UXT9	468 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	KDELC2	Q7Z4H8	507 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	PABPC5	Q96DU9	382 aa	Known RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	ZNF578	Q96N58	590 aa	Predicted RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	FAM105A	Q9NUU6	356 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	GPR83	Q9NYM4	423 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	PSORS1C1	Q9UIG5	152 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	ABCG2	Q9UNQ0	655 aa		18.22	■□□□□ 0.51
PTPA-223	ENST00000452489	UBA6	A0AVT1	1052 aa	Predicted RBP	18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	NUPL2	O15504	423 aa	Known RBP	18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	SSTR4	P31391	388 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	GMPS	P49915	693 aa	Predicted RBP	18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	SEMA3A	Q14563	771 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	PKDCC	Q504Y2	493 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	TOR1AIP1	Q5JTV8	583 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	IPMK	Q8NFU5	416 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	ST8SIA4	Q92187	359 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	GFM1	Q96RP9	751 aa	Known RBP	18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	TTPAL	Q9BTX7	342 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	NIFK	Q9BYG3	293 aa	Known RBP	18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	TRIM45	Q9H8W5	580 aa	Predicted RBP	18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	TLR6	Q9Y2C9	796 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489		A0A1W2PRG6	482 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	ASB14	A6NK59	587 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	ERCC2	P18074	760 aa		18.21	■□□□□ 0.51
PTPA-223	ENST00000452489	RPS19	P39019	145 aa	Known RBP	18.21	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms