RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 HSD17B1P14061 328 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 SLC6A2P23975 617 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 GDF5P43026 501 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 KCNK10P57789 538 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 DCDC1P59894 354 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 EMX2Q04743 252 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 ABRAXAS2Q15018 415 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 GRAMD1BQ3KR37 738 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 CDKL4Q5MAI5 379 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 IL27RAQ6UWB1 636 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 KIAA1324Q6UXG2 1013 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 MBOAT1Q6ZNC8 495 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 MILR1Q7Z6M3 343 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 SLC15A3Q8IY34 581 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 TMEM102Q8N9M5 508 aaPredicted RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 FNDC5Q8NAU1 212 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 ATP6V1E2Q96A05 226 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 LRGUKQ96M69 825 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 FAM129BQ96TA1 746 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 PHOX2BQ99453 314 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 CXorf56Q9H5V9 222 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 IL1RL2Q9HB29 575 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 CMTM6Q9NX76 183 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 CD84Q9UIB8 345 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 EP300Q09472 2414 aaPredicted RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 UPK3BL1B0FP48 263 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 UPK3BL2E5RIL1 263 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 NUAK1O60285 661 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 LILRB5O75023 590 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 RNASEH2AO75792 299 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 CTSLP07711 333 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 UQCRBP14927 111 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 TIMP2P16035 220 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 MSH3P20585 1137 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 ARL1P40616 181 aaPredicted RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 POLR2JP52435 117 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 YBX1P67809 324 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 NHLH1Q02575 133 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 ARHGEF7Q14155 803 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 CAPRIN1Q14444 709 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 TLR1Q15399 786 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 IRAK1BP1Q5VVH5 260 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 IL23RQ5VWK5 629 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 TMEM154Q6P9G4 183 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 ADCY4Q8NFM4 1077 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 PROKR1Q8TCW9 393 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 VPS33AQ96AX1 596 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 SLCO4A1Q96BD0 722 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 SIPA1Q96FS4 1042 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 DCUN1D1Q96GG9 259 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 BTBD9Q96Q07 612 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 PCDH12Q9NPG4 1184 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 NFKBIL1Q9UBC1 381 aaPredicted RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 PCDHA9Q9Y5H5 950 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 OTOGLQ3ZCN5 2332 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 DOCK9Q9BZ29 2069 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 MAGEA13PA6NCF6 341 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 ATP1B2P14415 290 aaPredicted RBP10.44□□□□□ -0.74
PKP4-206ENST00000452162 ATP6V1B2P21281 511 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 HMOX2P30519 316 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 RPS14P62263 151 aaKnown RBP10.44□□□□□ -0.74
PKP4-206ENST00000452162 CDKL1Q00532 357 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 NR6A1Q15406 480 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 SPATS1Q496A3 300 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 PAGE3Q5JUK9 113 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 ZFAND4Q86XD8 727 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 DHFR2Q86XF0 187 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 MMAAQ8IVH4 418 aaKnown RBP10.44□□□□□ -0.74
PKP4-206ENST00000452162 CATSPER1Q8NEC5 780 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 TMEM125Q96AQ2 219 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 HBEGFQ99075 208 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 NTMT1Q9BV86 223 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 SPATA16Q9BXB7 569 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 TRIM54Q9BYV2 358 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 IRF2BPLQ9H1B7 796 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 ACTL8Q9H568 366 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 TRPS1Q9UHF7 1281 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 PDE10AQ9Y233 779 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 ANGPTL3Q9Y5C1 460 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 RALGAPA1Q6GYQ0 2036 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 LAMA1P25391 3075 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 CCDC154A6NI56 674 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 ANKRD28O15084 1053 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 SGTAO43765 313 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 RNASEH1O60930 286 aaKnown RBP10.44□□□□□ -0.74
PKP4-206ENST00000452162 WDR47O94967 919 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 ENO2P09104 434 aaPredicted RBP10.44□□□□□ -0.74
PKP4-206ENST00000452162 EBLN1P0CF75 366 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 MPC1LP0DKB6 136 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 EPORP19235 508 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 SLC7A1P30825 629 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 GGT5P36269 586 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 NBL1P41271 181 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 CREB5Q02930 508 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 NFYCQ13952 458 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 MAP7D1Q3KQU3 841 aa10.44□□□□□ -0.74
PKP4-206ENST00000452162 TTC23LQ6PF05 361 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms