RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 VARS2Q5ST30 1063 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM46CQ5VWP2 391 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MBLAC2Q68D91 279 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TAPT1Q6NXT6 567 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM117BQ6P1L5 589 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PAPD4Q6PIY7 484 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC22A25Q6T423 547 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GK5Q6ZS86 529 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ASPGQ86U10 573 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RASGRP3Q8IV61 690 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MFSD6LQ8IWD5 586 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM71AQ8IYT1 594 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PAPD5Q8NDF8 572 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ADPRHL1Q8NDY3 354 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR2L5Q8NG80 312 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR8J3Q8NGG0 315 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ELP5Q8TE02 316 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CPA5Q8WXQ8 436 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC5A5Q92911 643 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CD101Q93033 1021 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 COL26A1Q96A83 441 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ELP4Q96EB1 424 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PTCHD1Q96NR3 888 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LENG8Q96PV6 779 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 GFM1Q96RP9 751 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ELF4Q99607 663 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF670Q9BS34 389 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FUZQ9BT04 418 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMED9Q9BVK6 235 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TARS2Q9BW92 718 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ERVK-6Q9BXR3 956 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ROGDIQ9GZN7 287 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMPRSS5Q9H3S3 457 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RPF1Q9H9Y2 349 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ERVK-5Q9HDB9 667 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NGRNQ9NPE2 291 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 SLAMF7Q9NQ25 335 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 INTS7Q9NVH2 962 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 PNPOQ9NVS9 261 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF69Q9UC07 566 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KLQ9UEF7 1012 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OAZ3Q9UMX2 235 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ENTPD4Q9Y227 616 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LIPT1Q9Y234 373 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PCDHGB7Q9Y5F8 929 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CNTNAP4Q9C0A0 1308 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 IGSF9BQ9UPX0 1349 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LAMA4Q16363 1823 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TJP1Q07157 1748 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HEG1Q9ULI3 1381 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GNG14A0A1W2PPG7 69 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 A0A1W2PRQ8 180 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TCRBV3S1A0A5B6 114 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RNF212BA8MTL3 300 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 M0R036 132 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 AZIN1O14977 448 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DCLK1O15075 740 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ST8SIA5O15466 376 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CREBL2O60519 120 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CILPO75339 1184 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HLA-DPB1P04440 258 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 UCHL1P09936 223 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DHRS4L1P0CG22 281 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 T-ENOLP0DO92 83 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CKMT2P17540 419 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CXCR2P25025 360 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 S100A3P33764 101 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CHI3L1P36222 383 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC1A3P43003 542 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MAGEA12P43365 314 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HAAOP46952 286 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 HSPA7P48741 367 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 AFF1P51825 1210 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CDH15P55291 814 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CDK3Q00526 305 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CREMQ03060 361 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PWP1Q13610 501 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DYRK1AQ13627 763 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NFIXQ14938 502 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PGM5Q15124 567 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SMAD1Q15797 465 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 TBCEQ15813 527 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 HSDL1Q3SXM5 330 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMEM236Q5W0B7 351 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PLA2G4FQ68DD2 849 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MSANTD2Q6P1R3 559 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PKN3Q6P5Z2 889 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF613Q6PF04 617 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZCCHC23Q6ZST2 131 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 USP30Q70CQ3 517 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CHSY3Q70JA7 882 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CYS1Q717R9 158 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SPATC1Q76KD6 591 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SPRED1Q7Z699 444 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FBXO39Q8N4B4 442 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KLHL36Q8N4N3 616 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF561Q8N587 486 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NKAPQ8N5F7 415 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 MINDY1Q8N5J2 469 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR5T3Q8NGG3 340 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms