RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CSNK1G3Q9Y6M4 447 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TNS1Q9HBL0 1735 aaKnown RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 CLRN2A0PK11 232 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 AZIN1O14977 448 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GSTA4O15217 222 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 KIAA0513O60268 411 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 SLC22A3O75751 556 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 PDE9AO76083 593 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 F9P00740 461 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CTSHP09668 335 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 LINC00032P0C843 101 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 RPL17P18621 184 aaKnown RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 CD72P21854 359 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CHMP24386 653 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 EVI2BP34910 448 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 POLR2JP52435 117 aaKnown RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 ARHGDIAP52565 204 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ATXN1P54253 815 aaKnown RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 POLR2GP62487 172 aaKnown RBP eCLIP8.43□□□□□ -1.06
LSM5-208ENST00000450169 HOXC5Q00444 222 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 MAB21L1Q13394 359 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 BAATQ14032 418 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 KIAA0319Q5VV43 1072 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 LIPIQ6XZB0 460 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TMPRSS11AQ6ZMR5 421 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CFAP77Q6ZQR2 320 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TSPYL5Q86VY4 417 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 CYP4Z1Q86W10 505 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CNTN4Q8IWV2 1026 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TAGAPQ8N103 731 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CDYL2Q8N8U2 506 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 RDM1Q8NG50 284 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 OR52H1Q8NGJ2 320 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 OR8K5Q8NH50 307 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ENKURQ8TC29 256 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GPR151Q8TDV0 419 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 L3HYPDHQ96EM0 354 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TMEM176AQ96HP8 235 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 B3GALT6Q96L58 329 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 PPM1MQ96MI6 270 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CCDC115Q96NT0 180 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 OPALINQ96PE5 141 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 BCO2Q9BYV7 579 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 PPIL3Q9H2H8 161 aaKnown RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 PRDM12Q9H4Q4 367 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GBA2Q9HCG7 927 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 PAK6Q9NQU5 681 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 POLLQ9UGP5 575 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 BTRCQ9Y297 605 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 A0A096LPI6 279 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 EFCAB10A6NFE3 127 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ZNF98A6NK75 572 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ERI2A8K979 691 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 SEC22BO75396 215 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 WBP4O75554 376 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 WDR47O94967 919 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 EDN1P05305 212 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 PGRP06401 933 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 FGF4P08620 206 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 LTA4HP09960 611 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 TGFB3P10600 412 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 CPB1P15086 417 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 C21orf33P30042 268 aaPredicted RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 HTR7P34969 479 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 KIR2DL3P43628 341 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 RGS6P49758 472 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 RGS7P49802 495 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 TPMTP51580 245 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 GBX2P52951 348 aaPredicted RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 FOXA1P55317 472 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 UFM1P61960 85 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 POU4F1Q01851 419 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 TCP10Q12799 353 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 KCNC3Q14003 757 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 POU4F3Q15319 338 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 FBXO43Q4G163 708 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ZNF667Q5HYK9 610 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 KCTD11Q693B1 232 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 PLET1Q6UQ28 207 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 DET1Q7L5Y6 550 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ADGRG3Q86Y34 549 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 PYROXD2Q8N2H3 581 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 NLGN4YQ8NFZ3 816 aaPredicted RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 ZNF675Q8TD23 568 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 ST8SIA4Q92187 359 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 RIT1Q92963 219 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 RHBDF1Q96CC6 855 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 AP2M1Q96CW1 435 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 GPR137Q96N19 417 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 CFHR5Q9BXR6 569 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 TUBB1Q9H4B7 451 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 MID1IP1Q9NPA3 183 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 FANCFQ9NPI8 374 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 IFT46Q9NQC8 304 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 AIG1Q9NVV5 245 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 TAS2R7Q9NYW3 318 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 NDRG4Q9ULP0 352 aaKnown RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 ALG5Q9Y673 324 aa8.42□□□□□ -1.06
LSM5-208ENST00000450169 KLRG2A4D1S0 409 aaPredicted RBP8.42□□□□□ -1.06
LSM5-208ENST00000450169 VPS4BO75351 444 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms