RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CTBSQ01459 385 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 ARHGAP19Q14CB8 494 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 KRT72Q14CN4 511 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 RPS6KA2Q15349 733 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 TCEA2Q15560 299 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 HIST2H2ACQ16777 129 aaPredicted RBP9.41□□□□□ -0.9
RFC4-210ENST00000449502 ALG11Q2TAA5 492 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 UAP1L1Q3KQV9 507 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 LSM12Q3MHD2 195 aaKnown RBP9.41□□□□□ -0.9
RFC4-210ENST00000449502 CCSMST1Q4G0I0 132 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 SGO1Q5FBB7 561 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 XKR6Q5GH73 641 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 PAGE2BQ5JRK9 111 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 HIST2H2AA3Q6FI13 130 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 CAPRIN2Q6IMN6 1127 aaKnown RBP9.41□□□□□ -0.9
RFC4-210ENST00000449502 LETMD1Q6P1Q0 360 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 SLC30A9Q6PML9 568 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 TAF8Q7Z7C8 310 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 PARGQ86W56 976 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 RASGRP3Q8IV61 690 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 FRMD1Q8N878 549 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 DCBLD1Q8N8Z6 715 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 MFSD2AQ8NA29 543 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 OR56A3Q8NH54 315 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 MAPK15Q8TD08 544 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 NSL1Q96IY1 281 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 HSPA12BQ96MM6 686 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 OR52B2Q96RD2 323 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 KCNA7Q96RP8 456 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 INSM2Q96T92 566 aaPredicted RBP9.41□□□□□ -0.9
RFC4-210ENST00000449502 HAUS8Q9BT25 410 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 NTMT1Q9BV86 223 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 PRDM8Q9NQV8 689 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.41□□□□□ -0.9
RFC4-210ENST00000449502 GPRC5BQ9NZH0 403 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 PLAGL1Q9UM63 463 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 DOLKQ9UPQ8 538 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 PLEKHM1Q9Y4G2 1056 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 DNAJC15Q9Y5T4 150 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 DGKBQ9Y6T7 804 aa9.41□□□□□ -0.9
RFC4-210ENST00000449502 TCF20Q9UGU0 1960 aaKnown RBP9.41□□□□□ -0.9
RFC4-210ENST00000449502 K7ESF4 209 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 FFAR3O14843 346 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 GPR42O15529 346 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 UGDHO60701 494 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 FUCA1P04066 466 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 MTHFD1P11586 935 aaKnown RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 GNAZP19086 355 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 PRDX3P30048 256 aaKnown RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 MNAT1P51948 309 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 FOXA1P55317 472 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 TBPL1P62380 186 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 RACK1P63244 317 aaKnown RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 IRX1P78414 480 aaPredicted RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 PHEXP78562 749 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 MXRA7P84157 204 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 BNIP1Q12981 228 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 TRAF3Q13114 568 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 CHIT1Q13231 466 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 BIRC2Q13490 618 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 SQLEQ14534 574 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 MAPRE2Q15555 327 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 TEAD4Q15561 434 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 RPE65Q16518 533 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.9
RFC4-210ENST00000449502 KIF19Q2TAC6 998 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 UGT3A2Q3SY77 523 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 ATP6AP1LQ52LC2 224 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 LACTB2Q53H82 288 aaPredicted RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 PRAMEF14Q5SWL7 426 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 PRAMEF13Q5VWM6 474 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 LIPJQ5W064 366 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 SCIMPQ6UWF3 145 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 WASH2PQ6VEQ5 465 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 MAMSTRQ6ZN01 415 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 SPATA19Q7Z5L4 167 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 IQCHQ86VS3 1027 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 PPFIBP2Q8ND30 876 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 SETD7Q8WTS6 366 aaKnown RBP9.4□□□□□ -0.9
RFC4-210ENST00000449502 ZNF480Q8WV37 535 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 SELENOMQ8WWX9 145 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 SMPDL3AQ92484 453 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 REPS1Q96D71 796 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 CMTM5Q96DZ9 223 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 PPP3R2Q96LZ3 170 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 CATSPER2Q96P56 530 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 TMEM168Q9H0V1 697 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 TNFRSF12AQ9NP84 129 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 WASH6PQ9NQA3 447 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 ARMCX1Q9P291 453 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 TAGLN3Q9UI15 199 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 WDR37Q9Y2I8 494 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 RNF11Q9Y3C5 154 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 CDH23Q9H251 3354 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 ANKRD36A6QL64 1941 aa9.4□□□□□ -0.9
RFC4-210ENST00000449502 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.39□□□□□ -0.91
RFC4-210ENST00000449502 CCDC163A0A0D9SF12 145 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms