RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 SRPK3Q9UPE1 567 aa27.22■■□□□ 1.95
CBX4-202ENST00000448310 HIVEP3Q5T1R4 2406 aa27.22■■□□□ 1.95
CBX4-202ENST00000448310 KDM1AO60341 852 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 MRPL49Q13405 166 aaKnown RBP27.21■■□□□ 1.95
CBX4-202ENST00000448310 NKAIN1Q4KMZ8 207 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 HPS6Q86YV9 775 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 OR2Y1Q8NGV0 311 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 NDC1Q9BTX1 674 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 MENTQ9BUN1 341 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 EURLQ9NYK6 297 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 PCM1Q15154 2024 aa27.21■■□□□ 1.95
CBX4-202ENST00000448310 TCP11X1B4DZS4 312 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 F8W8V4 182 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 PEX12O00623 359 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 SEMA7AO75326 666 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 GPC4O75487 556 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 GRB7Q14451 532 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 DCAF10Q5QP82 559 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 VWA5B1Q5TIE3 1220 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 MRPL14Q6P1L8 145 aaKnown RBP27.2■■□□□ 1.94
CBX4-202ENST00000448310 PPP1R32Q7Z5V6 425 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 GAS2L3Q86XJ1 694 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 SLC13A5Q86YT5 568 aaPredicted RBP27.2■■□□□ 1.94
CBX4-202ENST00000448310 SPC24Q8NBT2 197 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 FER1L6-AS2Q96M78 137 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 IP6K3Q96PC2 410 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 CARD6Q9BX69 1037 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 SLC22A11Q9NSA0 550 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 P4HTMQ9NXG6 502 aa27.2■■□□□ 1.94
CBX4-202ENST00000448310 MARCH4Q9P2E8 410 aaPredicted RBP27.2■■□□□ 1.94
CBX4-202ENST00000448310 KRT86O43790 486 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 APRTP07741 180 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 UMODP07911 640 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 ZSCAN5DPP0CG00 497 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 RNF224P0DH78 156 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 CD9P21926 228 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 ALAS2P22557 587 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 GALNT16Q8N428 558 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 CLEC1AQ8NC01 280 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 PPHLN1Q8NEY8 458 aaKnown RBP27.19■■□□□ 1.94
CBX4-202ENST00000448310 ASZ1Q8WWH4 475 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 C19orf60Q96EN9 201 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 TSSK1BQ9BXA7 367 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 FRMD8P1Q9BZ68 369 aaPredicted RBP27.19■■□□□ 1.94
CBX4-202ENST00000448310 CATSPERZQ9NTU4 200 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 DOCK10Q96BY6 2186 aa27.19■■□□□ 1.94
CBX4-202ENST00000448310 MDC1Q14676 2089 aaKnown RBP27.18■■□□□ 1.94
CBX4-202ENST00000448310 EIF2S3LQ2VIR3 472 aaKnown RBP27.18■■□□□ 1.94
CBX4-202ENST00000448310 PLEKHN1Q494U1 663 aaPredicted RBP27.18■■□□□ 1.94
CBX4-202ENST00000448310 NLRP9Q7RTR0 991 aa27.18■■□□□ 1.94
CBX4-202ENST00000448310 MCATQ8IVS2 390 aaKnown RBP27.18■■□□□ 1.94
CBX4-202ENST00000448310 DCUN1D3Q8IWE4 304 aa27.18■■□□□ 1.94
CBX4-202ENST00000448310 PTERQ96BW5 349 aa27.18■■□□□ 1.94
CBX4-202ENST00000448310 CHRAC1Q9NRG0 131 aa27.18■■□□□ 1.94
CBX4-202ENST00000448310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP27.18■■□□□ 1.94
CBX4-202ENST00000448310 C5AR2Q9P296 337 aa27.18■■□□□ 1.94
CBX4-202ENST00000448310 APOA4P06727 396 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 ITGAXP20702 1163 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 AOAHP28039 575 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 PPARGP37231 505 aaPredicted RBP27.17■■□□□ 1.94
CBX4-202ENST00000448310 GRIA3P42263 894 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 MYBPC3Q14896 1274 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 TTLL10Q6ZVT0 673 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 RNF10Q8N5U6 811 aaKnown RBP27.17■■□□□ 1.94
CBX4-202ENST00000448310 CCDC89Q8N998 374 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 ANAPC5Q9UJX4 755 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 GUCA1BQ9UMX6 200 aa27.17■■□□□ 1.94
CBX4-202ENST00000448310 RPN2P04844 631 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 CD63P08962 238 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 MCM3P25205 808 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 GCGRP47871 477 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 SESN2P58004 480 aaPredicted RBP27.16■■□□□ 1.94
CBX4-202ENST00000448310 CRADDP78560 199 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 C4orf17Q53FE4 359 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 AARS2Q5JTZ9 985 aaKnown RBP27.16■■□□□ 1.94
CBX4-202ENST00000448310 FCRL6Q6DN72 434 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 UNC5DQ6UXZ4 953 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 OR2L8Q8NGY9 312 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 SSC4DQ8WTU2 575 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 SLC29A3Q9BZD2 475 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 ZNF552Q9H707 407 aaPredicted RBP27.16■■□□□ 1.94
CBX4-202ENST00000448310 PAK5Q9P286 719 aa27.16■■□□□ 1.94
CBX4-202ENST00000448310 PLEKHB1Q9UF11 243 aaPredicted RBP27.16■■□□□ 1.94
CBX4-202ENST00000448310 KRT87PA6NCN2 255 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 PRMT5O14744 637 aaPredicted RBP27.15■■□□□ 1.94
CBX4-202ENST00000448310 SLCO2B1O94956 709 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 RPL22P35268 128 aaKnown RBP27.15■■□□□ 1.94
CBX4-202ENST00000448310 TMED2Q15363 201 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 CYP2A13Q16696 494 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 PTRHD1Q6GMV3 140 aaKnown RBP27.15■■□□□ 1.94
CBX4-202ENST00000448310 DLG3Q92796 817 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 PEX13Q92968 403 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 SNRNP40Q96DI7 357 aaKnown RBP27.15■■□□□ 1.94
CBX4-202ENST00000448310 SLC39A10Q9ULF5 831 aa27.15■■□□□ 1.94
CBX4-202ENST00000448310 RUVBL2Q9Y230 463 aaKnown RBP27.15■■□□□ 1.94
CBX4-202ENST00000448310 RASGRF2O14827 1237 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 CD3EAPO15446 510 aaKnown RBP27.14■■□□□ 1.94
CBX4-202ENST00000448310 ALOX12BO75342 701 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 S1PR4O95977 384 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 IGHEP01854 428 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms