RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 RRAGCQ9HB90 399 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 GMPPBQ9Y5P6 360 aa18.77■□□□□ 0.6
HMGA1-205ENST00000447654 MBLAC1A4D2B0 266 aaPredicted RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 PIP5K1BO14986 540 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 TREHO43280 583 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ATG13O75143 517 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 PRR35P0CG20 571 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 HMGCLP35914 325 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ZFP36L2P47974 494 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 BEX3Q00994 111 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF33BQ06732 778 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 PAFAH1B3Q15102 231 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 LRRC8DQ7L1W4 858 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 RNF130Q86XS8 419 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 MFSD6LQ8IWD5 586 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 OR8K5Q8NH50 307 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 KHSRPQ92945 711 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 TESCQ96BS2 214 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 TUBGCP3Q96CW5 907 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 DCLRE1CQ96SD1 692 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 RAD9AQ99638 391 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 NT5C1AQ9BXI3 368 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 PLCXD1Q9NUJ7 323 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 NDRG4Q9ULP0 352 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 DIMT1Q9UNQ2 313 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF175Q9Y473 711 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 SLC22A3O75751 556 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 SCELO95171 688 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 STAU1O95793 577 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 SCNN1AP37088 669 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 POLR2JP52435 117 aaKnown RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 HERVK_113P63132 956 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 FKBP1BP68106 108 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 CSHL1Q14406 222 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 GOLGA7BQ2TAP0 167 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 SETMARQ53H47 684 aaPredicted RBP18.76■□□□□ 0.59
HMGA1-205ENST00000447654 RAP1GAP2Q684P5 730 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 NAPEPLDQ6IQ20 393 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 SLC27A1Q6PCB7 646 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ALKAL1Q6UXT8 129 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 TLK2Q86UE8 772 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 KRT73Q86Y46 540 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 HS3ST5Q8IZT8 346 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 FAM181AQ8N9Y4 354 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 OR7D4Q8NG98 312 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 MYDGFQ969H8 173 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ERVK-6Q9BXR3 956 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 HDHD5Q9BXW7 423 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 TMEM168Q9H0V1 697 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 SPNS1Q9H2V7 528 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 KLK14Q9P0G3 267 aa18.76■□□□□ 0.59
HMGA1-205ENST00000447654 ARNTLO00327 626 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 STX16O14662 325 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 TFECO14948 347 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 RECQL4O94761 1208 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 TSPAN12O95859 305 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 CYBBP04839 570 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 HOXD4P09016 255 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 DARSP14868 501 aaKnown RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 QPRTQ15274 297 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 KYAT1Q16773 422 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PKDCCQ504Y2 493 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 UNC50Q53HI1 259 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 LAIR1Q6GTX8 287 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 CCDC117Q8IWD4 279 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PGLYRP2Q96PD5 576 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 B3GNT5Q9BYG0 378 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PAK6Q9NQU5 681 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 POLG2Q9UHN1 485 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 NT5C1B-RDH14C9J2C7 533 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 H0YC42 278 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF623O75123 536 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 CPB1P15086 417 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 GOT1P17174 413 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 IGFBP6P24592 240 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PTPN3P26045 913 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 NOS2P35228 1153 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 TAB1Q15750 504 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 SOWAHAQ2M3V2 549 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 DCAF4L1Q3SXM0 396 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PCID2Q5JVF3 399 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 SLC35F1Q5T1Q4 408 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 GPAT4Q86UL3 456 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 ADGRG3Q86Y34 549 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 SPATA6LQ8N4H0 392 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 C2CD4AQ8NCU7 369 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 CCNYQ8ND76 341 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 HERVK_113Q902F9 699 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 RPRD1AQ96P16 312 aaPredicted RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PRDM12Q9H4Q4 367 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 GOLGA2P5Q9HBQ8 144 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 SMURF1Q9HCE7 757 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 INTS7Q9NVH2 962 aaKnown RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 FBXO10Q9UK96 956 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 AGO1Q9UL18 857 aaKnown RBP18.75■□□□□ 0.59
HMGA1-205ENST00000447654 PKP3Q9Y446 797 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 HSPB11Q9Y547 144 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 V9GYH0 126 aa18.75■□□□□ 0.59
HMGA1-205ENST00000447654 RRN3P2A6NIE6 340 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms