RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 VAC14Q08AM6 782 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 SLMAPQ14BN4 828 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 TGIF1Q15583 401 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 DTX1Q86Y01 620 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 RELL1Q8IUW5 271 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 EIF1ADQ8N9N8 165 aaKnown RBP15.84■□□□□ 0.13
SF3A1-204ENST00000447376 OR2L8Q8NGY9 312 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 PMEPA1Q969W9 287 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 GPR21Q99679 349 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 PITPNM3Q9BZ71 974 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 SLC7A5P2Q9GIP4 190 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 SPATA7Q9P0W8 599 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-204ENST00000447376 SERTAD3Q9UJW9 196 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 NFU1Q9UMS0 254 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 DHRS7Q9Y394 339 aa15.84■□□□□ 0.13
SF3A1-204ENST00000447376 TMEM184BQ9Y519 407 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-204ENST00000447376 TCRBV9S1A1TA0A576 114 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 ZBTB14O43829 449 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 KIAA0754O94854 1291 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 FKBP9O95302 570 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 MATN4O95460 622 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 MPC1LP0DKB6 136 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 FOLR1P15328 257 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 HSD17B2P37059 387 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 BDKRB1P46663 353 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 PDAP1Q13442 181 aaKnown RBP15.83■□□□□ 0.12
SF3A1-204ENST00000447376 MAP7Q14244 749 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 GBX1Q14549 363 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 KCNAB1Q14722 419 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 NAA25Q14CX7 972 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 SLC5A12Q1EHB4 618 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 ACSBG2Q5FVE4 666 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 ARHGAP40Q5TG30 622 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 FAM45BPQ6NSW5 357 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 C6orf15Q6UXA7 325 aaPredicted RBP15.83■□□□□ 0.12
SF3A1-204ENST00000447376 STRA8Q7Z7C7 330 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 TMEM126BQ8IUX1 230 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 GPR135Q8IZ08 494 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 GPATCH11Q8N954 259 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 C19orf47Q8N9M1 422 aaKnown RBP15.83■□□□□ 0.12
SF3A1-204ENST00000447376 LRRN4CLQ8ND94 238 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 FAM45AQ8TCE6 357 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 NKD1Q969G9 470 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 TCTN2Q96GX1 697 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 TRAPPC9Q96Q05 1148 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 LRRC4CQ9HCJ2 640 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 PILRAQ9UKJ1 303 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 NFS1Q9Y697 457 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 PKD1L2Q7Z442 2459 aa15.83■□□□□ 0.12
SF3A1-204ENST00000447376 TEX51A0A1B0GUA7 166 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 CPNE3O75131 537 aaKnown RBP15.82■□□□□ 0.12
SF3A1-204ENST00000447376 ST6GAL1P15907 406 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 ABHD18Q0P651 414 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 NAB1Q13506 487 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 SF1Q15637 639 aaKnown RBP15.82■□□□□ 0.12
SF3A1-204ENST00000447376 GPR19Q15760 415 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 ZNF549Q6P9A3 640 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 CTAGE3PQ8IX95 158 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 MYO1HQ8N1T3 1032 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 OR2A14Q96R47 310 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 NDNQ99608 321 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 CPNE1Q99829 537 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 GPN2Q9H9Y4 310 aaPredicted RBP15.82■□□□□ 0.12
SF3A1-204ENST00000447376 CPNE5Q9HCH3 593 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 CIDEBQ9UHD4 219 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 RUVBL2Q9Y230 463 aaKnown RBP15.82■□□□□ 0.12
SF3A1-204ENST00000447376 ADAMTS20P59510 1910 aa15.82■□□□□ 0.12
SF3A1-204ENST00000447376 FAM159BA6NKW6 160 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 TMEM150CB9EJG8 249 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 SCRG1O75711 98 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 SYF2O95926 243 aaKnown RBP15.81■□□□□ 0.12
SF3A1-204ENST00000447376 F7P08709 466 aaPredicted RBP15.81■□□□□ 0.12
SF3A1-204ENST00000447376 CYP2A7P20853 494 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 MCM3P25205 808 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 GABRB3P28472 473 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 OAS2P29728 719 aaKnown RBP15.81■□□□□ 0.12
SF3A1-204ENST00000447376 ECHS1P30084 290 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 SLC12A2P55011 1212 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 GPX6P59796 221 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 FBXO38Q6PIJ6 1188 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 VASH2Q86V25 355 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 TAX1BP1Q86VP1 789 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 CPNE9Q8IYJ1 553 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 OR9A1PQ8NGU1 263 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 CD200R1Q8TD46 325 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 FBF1Q8TES7 1133 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.81■□□□□ 0.12
SF3A1-204ENST00000447376 VPS39Q96JC1 886 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 PPM1MQ96MI6 270 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 KLHL25Q9H0H3 589 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 PRORYQ9H606 182 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 IRAK4Q9NWZ3 460 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 SPHK1Q9NYA1 384 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 GALPQ9UBC7 116 aa15.81■□□□□ 0.12
SF3A1-204ENST00000447376 K7ENP7 123 aa15.8■□□□□ 0.12
SF3A1-204ENST00000447376 PSIP1O75475 530 aaKnown RBP15.8■□□□□ 0.12
SF3A1-204ENST00000447376 DLGAP3O95886 979 aa15.8■□□□□ 0.12
SF3A1-204ENST00000447376 KLK3P07288 261 aaPredicted RBP15.8■□□□□ 0.12
SF3A1-204ENST00000447376 HBQ1P09105 142 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms