RNA–Protein interactions for RNA: ENST00000445241.5

PTPA-222, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-222	ENST00000445241	RRP8	O43159	456 aa	Known RBP	14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	KIF1C	O43896	1103 aa	Known RBP	14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	F7	P08709	466 aa	Predicted RBP	14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ZNF37A	P17032	561 aa	Predicted RBP	14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ITIH1	P19827	911 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	MCM3	P25205	808 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	SPR	P35270	261 aa	Predicted RBP	14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ETV5	P41161	510 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ARL4D	P49703	201 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	MAPK10	P53779	464 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	PPP1CA	P62136	330 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	TMTC4	Q5T4D3	741 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	PAQR3	Q6TCH7	311 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	CCDC91	Q7Z6B0	441 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	CPNE9	Q8IYJ1	553 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	MCOLN3	Q8TDD5	553 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	FBF1	Q8TES7	1133 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	EEF1AKMT1	Q8WVE0	214 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	USP7	Q93009	1102 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ELMO2	Q96JJ3	720 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	OR2A14	Q96R47	310 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	CYTH2	Q99418	400 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	SLC12A9	Q9BXP2	914 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	PDE7B	Q9NP56	450 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ZMIZ1	Q9ULJ6	1067 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	KLK4	Q9Y5K2	254 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	ASPM	Q8IZT6	3477 aa		14.15	□□□□□ -0.14
PTPA-222	ENST00000445241	HEATR5B	Q9P2D3	2071 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241		A0A0J9YY10	115 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	PMS2P1	A4D2B8	440 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	CXorf49	A8MYA2	514 aa	Predicted RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	POLR1C	O15160	346 aa	Predicted RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	TLX3	O43711	291 aa	Predicted RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	PRAMEF10	O60809	474 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	TSPAN12	O95859	305 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	ENO2	P09104	434 aa	Predicted RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	FGF5	P12034	268 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	UGT2B7	P16662	529 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	CYP2A7	P20853	494 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	TNFRSF8	P28908	595 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	EIF2S3	P41091	472 aa	Known RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	BDKRB1	P46663	353 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	SEPHS1	P49903	392 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	SLC12A2	P55011	1212 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	AP1S2	P56377	157 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	CTAGE3P	Q8IX95	158 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	LINC01555	Q8NAE3	123 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	FLVCR1-AS1	Q8TAF5	88 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	LINGO1	Q96FE5	620 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	TCTN2	Q96GX1	697 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	TRAPPC9	Q96Q05	1148 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	OLFM1	Q99784	485 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	ACSS3	Q9H6R3	686 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	FANCE	Q9HB96	536 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	PARVB	Q9HBI1	364 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	INTS7	Q9NVH2	962 aa	Known RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	NINJ2	Q9NZG7	142 aa		14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	NOVA2	Q9UNW9	492 aa	Known RBP	14.14	□□□□□ -0.15
PTPA-222	ENST00000445241	ISM1	B1AKI9	464 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	STMND1	H3BQB6	276 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	TAF4	O00268	1085 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	PRICKLE3	O43900	615 aa	Predicted RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	ABHD2	P08910	425 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	RHOXF2B	P0C7M4	288 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	LIPC	P11150	499 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	OAS2	P29728	719 aa	Known RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	ABCG1	P45844	678 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	MAP7	Q14244	749 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	ST3GAL2	Q16842	350 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	LRRC69	Q6ZNQ3	347 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	UBE2R2	Q712K3	238 aa	Predicted RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	TRMT10C	Q7L0Y3	403 aa	Known RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	PIWIL4	Q7Z3Z4	852 aa	Known RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	PPP1R3B	Q86XI6	285 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	PPM1N	Q8N819	430 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	DENND1A	Q8TEH3	1009 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	SMPDL3A	Q92484	453 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	CCDC138	Q96M89	665 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	RHOXF2	Q9BQY4	288 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	TRIM54	Q9BYV2	358 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	CDC42EP4	Q9H3Q1	356 aa	Known RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	FGF21	Q9NSA1	209 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	SOHLH2	Q9NX45	425 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	SPHK1	Q9NYA1	384 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	PLAGL1	Q9UM63	463 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	NFU1	Q9UMS0	254 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	RUVBL2	Q9Y230	463 aa	Known RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	SSUH2	Q9Y2M2	353 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	TMEM184B	Q9Y519	407 aa	Predicted RBP	14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	B3GALT1	Q9Y5Z6	326 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	SEC16A	O15027	2179 aa		14.13	□□□□□ -0.15
PTPA-222	ENST00000445241	DMXL2	Q8TDJ6	3036 aa		14.12	□□□□□ -0.15
PTPA-222	ENST00000445241	PKD1L2	Q7Z442	2459 aa		14.12	□□□□□ -0.15
PTPA-222	ENST00000445241	CCDC189	A1A4V9	331 aa		14.12	□□□□□ -0.15
PTPA-222	ENST00000445241	PABPN1L	A6NDY0	278 aa	Known RBP	14.12	□□□□□ -0.15
PTPA-222	ENST00000445241	SLC9B1P1	A6NJY1	282 aa		14.12	□□□□□ -0.15
PTPA-222	ENST00000445241	SRRM3	A6NNA2	597 aa	Predicted RBP	14.12	□□□□□ -0.15
PTPA-222	ENST00000445241	TARM1	B6A8C7	271 aa		14.12	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms