RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 C14orf119Q9NWQ9 140 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 DYTNA2CJ06 578 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 DLGAP1O14490 977 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 RPL34P49207 117 aaKnown RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 CDH12P55289 794 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 SPIBQ01892 262 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 USP39Q53GS9 565 aaKnown RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 HECTD3Q5T447 861 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 THOC7Q6I9Y2 204 aaKnown RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 ADGRG2Q8IZP9 1017 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 CD200R1Q8TD46 325 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 SH3YL1Q96HL8 342 aaPredicted RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 GPR62Q9BZJ7 368 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 TLR9Q9NR96 1032 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 TBCCD1Q9NVR7 557 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 RHCGQ9UBD6 479 aa11.38□□□□□ -0.59
HCFC1-203ENST00000444191 CAB39Q9Y376 341 aaPredicted RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 ZNF638Q14966 1978 aaKnown RBP11.38□□□□□ -0.59
HCFC1-203ENST00000444191 A0A0U1RQF3 1178 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ASPDHA6ND91 283 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 MED26O95402 600 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 DNAJB1P25685 340 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CHI3L1P36222 383 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 HNF4AP41235 474 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 NR4A2P43354 598 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 RECQLP46063 649 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 GALNT1Q10472 559 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CTU2Q2VPK5 515 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 SPRED1Q7Z699 444 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TRUB1Q8WWH5 349 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ZNF583Q96ND8 569 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 AMBRA1Q9C0C7 1298 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ZDHHC6Q9H6R6 413 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CTPS2Q9NRF8 586 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 DOCK3Q8IZD9 2030 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CLIC1O00299 241 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TPST2O60704 377 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CCNKO75909 580 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 PRAMEF12O95522 483 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ESR1P03372 595 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 BCKDHAP12694 445 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ENGP17813 658 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ALDH7A1P49419 539 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 DEFA1P59665 94 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 DEFA3P59666 94 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 FOXM1Q08050 763 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CSTF3Q12996 717 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TOP3AQ13472 1001 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CHRNA6Q15825 494 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 FAM171BQ6P995 826 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 BHLHA9Q7RTU4 235 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 AKAP14Q86UN6 197 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CYP4Z1Q86W10 505 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 FAM217AQ8IXS0 508 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 LMNTD1Q8N9Z9 388 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 OR13F1Q8NGS4 319 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 OR5AK3PQ8NH89 298 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 LGALS12Q96DT0 336 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 IL4I1Q96RQ9 567 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 BARD1Q99728 777 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 MUC13Q9H3R2 512 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 NLE1Q9NVX2 485 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 RAB23Q9ULC3 237 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 WDR81Q562E7 1941 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 A0A096LPI6 279 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 MROH6A6NGR9 719 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 H0YAE9 185 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 SLC28A1O00337 649 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 SCELO95171 688 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CLDN9O95484 217 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 FABP3P05413 133 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 GGT1P19440 569 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TACR1P25103 407 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 C21orf33P30042 268 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 SLC26A3P40879 764 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 PTGER3P43115 390 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CTSKP43235 329 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 MLLT10P55197 1068 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CHIT1Q13231 466 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 VEPH1Q14D04 833 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 SOWAHCQ53LP3 525 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 INO80DQ53TQ3 878 aaPredicted RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 RBFAQ8N0V3 343 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TTC30BQ8N4P2 665 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ZBTB2Q8N680 514 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 HDAC2Q92769 488 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 KAT8Q9H7Z6 458 aaKnown RBP11.37□□□□□ -0.59
HCFC1-203ENST00000444191 CSNK1G1Q9HCP0 422 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 GPRC5BQ9NZH0 403 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 NUDT4Q9NZJ9 180 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 TMEM9Q9P0T7 183 aa11.37□□□□□ -0.59
HCFC1-203ENST00000444191 ABCD2Q9UBJ2 740 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms