RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CAPN1P07384 714 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 THEGLP0DJG4 465 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 HGFP14210 728 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 HMOX2P30519 316 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 INHBCP55103 352 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SIGLEC14Q08ET2 396 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PRKG2Q13237 762 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 TSTA3Q13630 321 aaPredicted RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 LRP8Q14114 963 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 KRT33BQ14525 404 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 ALG11Q2TAA5 492 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 METTL21CQ5VZV1 264 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 THOC6Q86W42 341 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLC22A18ASQ8N1D0 253 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PPFIBP2Q8ND30 876 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 ZNF480Q8WV37 535 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 STON2Q8WXE9 905 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PRR11Q96HE9 360 aaPredicted RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLC6A18Q96N87 628 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CCDC28BQ9BUN5 200 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 NUSAP1Q9BXS6 441 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PCED1AQ9H1Q7 454 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SPATA6Q9NWH7 488 aaPredicted RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLC12A4Q9UP95 1085 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 WDR37Q9Y2I8 494 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 K7ESF4 209 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CLDN9O95484 217 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 LINC00032P0C843 101 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 EBLN1P0CF75 366 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CD27P26842 260 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 HALP42357 657 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 MNAT1P51948 309 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 TBPL1P62380 186 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CTBSQ01459 385 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 UBAP2LQ14157 1087 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 UAP1L1Q3KQV9 507 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CAPRIN2Q6IMN6 1127 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CAPN13Q6MZZ7 669 aaPredicted RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 DUS1LQ6P1R4 473 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 CYB5D1Q6P9G0 228 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLC30A9Q6PML9 568 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLC36A4Q6YBV0 504 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 OR56A3Q8NH54 315 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 MAELQ96JY0 434 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 FERD3LQ96RJ6 166 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 NTMT1Q9BV86 223 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PRDM8Q9NQV8 689 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SAR1AQ9NR31 198 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 INTS7Q9NVH2 962 aaKnown RBP9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 LNPEPQ9UIQ6 1025 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PLAGL1Q9UM63 463 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 PTGDR2Q9Y5Y4 395 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 TECTAO75443 2155 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 USP34Q70CQ2 3546 aa9.23□□□□□ -0.93
SMPD4P1-203ENST00000443839 SPTY2D1-AS1A0A0U1RR47 76 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 OR52A4PA6NMU1 304 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 FFAR3O14843 346 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 GPR42O15529 346 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 DCXO43602 365 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 PI15O43692 258 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 EPORP19235 508 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 AK4P27144 223 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 ACTR1BP42025 376 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 PNLIPRP1P54315 467 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 ACTR1AP61163 376 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 ILF3Q12906 894 aaKnown RBP eCLIP9.22□□□□□ -0.932e-8■■■■■ 29.6
SMPD4P1-203ENST00000443839 BNIP1Q12981 228 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 CDC16Q13042 620 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 GALNTL6Q49A17 601 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 THEMIS2Q5TEJ8 643 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TMEM198Q66K66 360 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 CWF19L1Q69YN2 538 aaKnown RBP9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TBC1D21Q8IYX1 336 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 CHCHD4Q8N4Q1 142 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 FAM174AQ8TBP5 190 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 ACTRT2Q8TDY3 377 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TUBGCP3Q96CW5 907 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 HSPA12BQ96MM6 686 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 INSM2Q96T92 566 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 ORAI3Q9BRQ5 295 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TMEM168Q9H0V1 697 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 MIR1-1HGQ9H1L0 117 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TUBB1Q9H4B7 451 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TXLNGQ9NUQ3 528 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 TRPS1Q9UHF7 1281 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 PNMA8BQ9ULN7 279 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 G3BP2Q9UN86 482 aaKnown RBP9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 RNF11Q9Y3C5 154 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 ST14Q9Y5Y6 855 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLCO1B1Q9Y6L6 691 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 DGKBQ9Y6T7 804 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 SPAG17Q6Q759 2223 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 WDFY4Q6ZS81 3184 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 PRR19A6NJB7 356 aa9.22□□□□□ -0.93
SMPD4P1-203ENST00000443839 CLGNO14967 610 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms