RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GBA3Q9H227 469 aa13.8□□□□□ -0.2
HMGN1-208ENST00000443046 SOX17Q9H6I2 414 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-208ENST00000443046 SUCOQ9UBS9 1254 aaKnown RBP13.8□□□□□ -0.2
HMGN1-208ENST00000443046 CTSFQ9UBX1 484 aa13.8□□□□□ -0.2
HMGN1-208ENST00000443046 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
HMGN1-208ENST00000443046 CACNA1CQ13936 2221 aa13.8□□□□□ -0.2
HMGN1-208ENST00000443046 FITM1A5D6W6 292 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 HACD1B0YJ81 288 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 BHMG1C9JSJ3 638 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-208ENST00000443046 H7C0S8 307 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 CCL21O00585 134 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 LIN7AO14910 233 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-208ENST00000443046 ANXA9O76027 345 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 AP2A2O94973 939 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 CRTAMO95727 393 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 MAGP20916 626 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 GEMP55040 296 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 FANCCQ00597 558 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 RBBP7Q16576 425 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.79□□□□□ -0.2
HMGN1-208ENST00000443046 YOD1Q5VVQ6 348 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-208ENST00000443046 ATG9BQ674R7 924 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 DENND5AQ6IQ26 1287 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 MTFR2Q6P444 385 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 GFRALQ6UXV0 394 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 SHISA6Q6ZSJ9 500 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 SERPINA9Q86WD7 417 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 FAM20CQ8IXL6 584 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 P3H4Q92791 437 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 VPS50Q96JG6 964 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 CUTCQ9NTM9 273 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 ABI3Q9P2A4 366 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 ASF1AQ9Y294 204 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 NAV3Q8IVL0 2385 aa13.79□□□□□ -0.2
HMGN1-208ENST00000443046 CPAMD8Q8IZJ3 1885 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 TRGV8A0A0C4DH27 118 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 A0A1W2PQ72 361 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 SLC5A10A0PJK1 596 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 CCL22O00626 93 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 AP2A1O95782 977 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 SNRPB2P08579 225 aaKnown RBP13.78□□□□□ -0.2
HMGN1-208ENST00000443046 AGAP20933 346 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 MST1P26927 711 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 MC4RP32245 332 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 SLC1A1P43005 524 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 KRTAP10-9P60411 292 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 ARG2P78540 354 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 VWA2Q5GFL6 755 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 XKRXQ6PP77 449 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 TMEM207Q6UWW9 146 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 PIANPQ8IYJ0 282 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 LINC01555Q8NAE3 123 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 APOL2Q9BQE5 337 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 MENTQ9BUN1 341 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 ARNT2Q9HBZ2 717 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
HMGN1-208ENST00000443046 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
HMGN1-208ENST00000443046 ISM1B1AKI9 464 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 USP1O94782 785 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 UNC5CO95185 931 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 PRSS56P0CW18 603 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 CAPN3P20807 821 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 MCM3P25205 808 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 SSTR2P30874 369 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 OR1D4P47884 311 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.21
HMGN1-208ENST00000443046 ADORA2A-AS1P86434 159 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 KLC1Q07866 573 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 TCTE1Q5JU00 501 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 KLHDC8BQ8IXV7 354 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 KBTBD2Q8IY47 623 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 DNAJB8Q8NHS0 232 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 MAGEB10Q96LZ2 347 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-208ENST00000443046 ZNF160Q9HCG1 818 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 PLA2G3Q9NZ20 509 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 PLAGL1Q9UM63 463 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 TDRKHQ9Y2W6 561 aaKnown RBP13.77□□□□□ -0.21
HMGN1-208ENST00000443046 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.21
HMGN1-208ENST00000443046 SPG11Q96JI7 2443 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 hCG_1818297A0A087WSY0 165 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 KCNN4O15554 427 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 PRICKLE3O43900 615 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-208ENST00000443046 MED26O95402 600 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 PRR35P0CG20 571 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 ACPPP15309 386 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 COMTP21964 271 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 FDXRP22570 491 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 RBL1P28749 1068 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 PKLRP30613 574 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 RAB28P51157 221 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 GRM7Q14831 915 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms