RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CHST7Q9NS84 486 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 OLA1Q9NTK5 396 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 SMPD3Q9NY59 655 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 WWOXQ9NZC7 414 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SEC14L4Q9UDX3 406 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CD207Q9UJ71 328 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF222Q9UK12 451 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 VPS28Q9UK41 221 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MAB21L2Q9Y586 359 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ORC6Q9Y5N6 252 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 V9GYQ6 96 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TECTAO75443 2155 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NCAPD2Q15021 1401 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TCRBV7S2A1N4TA0A589 114 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CCDC154A6NI56 674 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DBX1A6NMT0 343 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF99A8MXY4 864 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF487B1APH4 448 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CHURC1-FNTBB4DL54 471 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 E9PI62 339 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 H3BM21 787 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 H3BRB1 525 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 M0R2N6 131 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 AP3D1O14617 1153 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 EI24O14681 340 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CCL16O15467 120 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 AKAP8O43823 692 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 DUSP11O75319 330 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 NOL4O94818 638 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 IPO13O94829 963 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ARIH2O95376 493 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC25A27O95847 323 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SNAI1O95863 264 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 MMP3P08254 477 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HOXD4P09016 255 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 DARSP14868 501 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 SELPP16109 830 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CBR1P16152 277 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 C4BPBP20851 252 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NR2F2P24468 414 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PTX3P26022 381 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ELK4P28324 431 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TYK2P29597 1187 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DHPSP49366 369 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 GNG10P50151 68 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF81P51508 661 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RIDAP52758 137 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 NDST1P52848 882 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CASP9P55211 416 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ANTXR2P58335 489 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RPS7P62081 194 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 NCS1P62166 190 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GPC5P78333 572 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RPL6Q02878 288 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 CREMQ03060 361 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 POU4F2Q12837 409 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 BAMBIQ13145 260 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DOC2AQ14183 400 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 PON3Q15166 354 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FAM189A2Q15884 450 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ALG11Q2TAA5 492 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HSDL1Q3SXM5 330 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FLYWCH1Q4VC44 716 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 FAM26FQ5R3K3 315 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ODR4Q5SWX8 454 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DCAF12L1Q5VU92 463 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 XRRA1Q6P2D8 792 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 LRFN4Q6PJG9 635 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CNSTQ6PJW8 725 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 AFTPHQ6ULP2 937 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CES3Q6UWW8 571 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 LBX2Q6XYB7 198 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CHSY3Q70JA7 882 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RAB11FIP2Q7L804 512 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZNF720Q7Z2F6 126 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 DHFR2Q86XF0 187 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GUF1Q8N442 669 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZCCHC9Q8N567 271 aaKnown RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 LRRC17Q8N6Y2 441 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 KDF1Q8NAX2 398 aaPredicted RBP2.72□□□□□ -1.97
LIG4-203ENST00000442234 IL17RDQ8NFM7 739 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 IPMKQ8NFU5 416 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CLHC1Q8NHS4 586 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC30A5Q8TAD4 765 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 WDR48Q8TAF3 677 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TAS1R2Q8TE23 839 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 C2CD4CQ8TF44 421 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 TFAP2CQ92754 450 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 SLC5A5Q92911 643 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 GPRASP2Q96D09 838 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CRELD1Q96HD1 420 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 KAZALD1Q96I82 304 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HYLS1Q96M11 299 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 ZSWIM3Q96MP5 696 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 NODALQ96S42 347 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 RAD9AQ99638 391 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 CLSTN3Q9BQT9 956 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 HERPUD2Q9BSE4 406 aa2.72□□□□□ -1.97
LIG4-203ENST00000442234 MED18Q9BUE0 208 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms