RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CBSLP0DN79 551 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 MAGP20916 626 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 ALAS2P22557 587 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 CCR7P32248 378 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 CBSP35520 551 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 ARSFP54793 590 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 SESN2P58004 480 aaPredicted RBP11.34□□□□□ -0.59
TTC28-203ENST00000442232 ACVR1Q04771 509 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 RAPSNQ13702 412 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 ZC3H12BQ5HYM0 836 aaKnown RBP11.34□□□□□ -0.59
TTC28-203ENST00000442232 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
TTC28-203ENST00000442232 JMJD6Q6NYC1 403 aaPredicted RBP11.34□□□□□ -0.59
TTC28-203ENST00000442232 TAX1BP1Q86VP1 789 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 LRRC6Q86X45 466 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 MPP5Q8N3R9 675 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 TTC29Q8NA56 475 aaPredicted RBP11.34□□□□□ -0.59
TTC28-203ENST00000442232 OR2Y1Q8NGV0 311 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 VPS50Q96JG6 964 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 GBP5Q96PP8 586 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 NUDT9Q9BW91 350 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 EIF2B3Q9NR50 452 aaKnown RBP11.34□□□□□ -0.59
TTC28-203ENST00000442232 BFARQ9NZS9 450 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 C5AR2Q9P296 337 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 ANKRD12Q6UB98 2062 aa11.34□□□□□ -0.59
TTC28-203ENST00000442232 CLEC18AA5D8T8 446 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 RASGRF2O14827 1237 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 IPO13O94829 963 aaKnown RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 SORBS2O94875 1100 aaKnown RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 FKBP9O95302 570 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 ETS1P14921 441 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 CD9P21926 228 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 GNLYP22749 145 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 GRIA1P42261 906 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 GABRA4P48169 554 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 SRSF1Q07955 248 aaKnown RBP eCLIP11.33□□□□□ -0.6
TTC28-203ENST00000442232 NAA25Q14CX7 972 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 SF1Q15637 639 aaKnown RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 TCTE1Q5JU00 501 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 IRAK1BP1Q5VVH5 260 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 YOD1Q5VVQ6 348 aaPredicted RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 CLEC18BQ6UXF7 455 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 ZNF534Q76KX8 674 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 OTOAQ7RTW8 1153 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 SDCCAG8Q86SQ7 713 aaPredicted RBP11.33□□□□□ -0.6
TTC28-203ENST00000442232 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 KRT222Q8N1A0 295 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 DNAJC22Q8N4W6 341 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 CLEC18CQ8NCF0 446 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 OR2L8Q8NGY9 312 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 MAGEC3Q8TD91 643 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 PNPLA2Q96AD5 504 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 FKBP10Q96AY3 582 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 IL22Q9GZX6 179 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 EURLQ9NYK6 297 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 LUZP4Q9P127 313 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 CIDEBQ9UHD4 219 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 CDYLQ9Y232 598 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 ZKSCAN5Q9Y2L8 839 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 PCM1Q15154 2024 aa11.33□□□□□ -0.6
TTC28-203ENST00000442232 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 SPENQ96T58 3664 aaKnown RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 A0A1B0GX78 115 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 BLACEA4D250 179 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 IQCF5A8MTL0 148 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 GPC4O75487 556 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 AOAHP28039 575 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 RPL22P35268 128 aaKnown RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 CCNFP41002 786 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 NPY2RP49146 381 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 EIF3BP55884 814 aaKnown RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 SEMA3AQ14563 771 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 INPP5JQ15735 1006 aaPredicted RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 CCNG2Q16589 344 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 RNF187Q5TA31 235 aaPredicted RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 MEI1Q5TIA1 1274 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 SLC6A19Q695T7 634 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 MRNIPQ6NTE8 343 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 TTLL10Q6ZVT0 673 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 PRUNE1Q86TP1 453 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 LDB1Q86U70 411 aaPredicted RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 VRK3Q8IV63 474 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 MCATQ8IVS2 390 aaKnown RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 GALNT16Q8N428 558 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 C2orf73Q8N5S3 287 aaPredicted RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 FLVCR1-AS1Q8TAF5 88 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 LKAAEAR1Q8TD35 194 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 PTERQ96BW5 349 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 IL17FQ96PD4 163 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 SMAD5Q99717 465 aaKnown RBP11.32□□□□□ -0.6
TTC28-203ENST00000442232 SELENOSQ9BQE4 189 aa11.32□□□□□ -0.6
TTC28-203ENST00000442232 ILKAPQ9H0C8 392 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms