RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CCDC138Q96M89 665 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PAFAH2Q99487 392 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 SERPINI1Q99574 410 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PRPF18Q99633 342 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 FEM1AQ9BSK4 669 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 DRC3Q9H069 523 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PAIP1Q9H074 479 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 MRPL46Q9H2W6 279 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 C10orf88Q9H8K7 445 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 CLK4Q9HAZ1 481 aaKnown RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PCDH9Q9HC56 1237 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 TMEM8AQ9HCN3 771 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 THAP1Q9NVV9 213 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 GID8Q9NWU2 228 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 PLLPQ9Y342 182 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 TMEM184BQ9Y519 407 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 OR51B4Q9Y5P0 310 aa6.33□□□□□ -1.4
HDAC6-210ENST00000441703 KLF2Q9Y5W3 355 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-210ENST00000441703 POLEQ07864 2286 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 A0A087WXM4 84 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TRIM64A6NGJ6 449 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ARGFXA6NJG6 315 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 RNF103O00237 685 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 KPNA4O00629 521 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 POLR1CO15160 346 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PRICKLE3O43900 615 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CREG1O75629 220 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 GABBR2O75899 941 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 DLGAP3O95886 979 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 IGLV3-25P01717 112 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 FYNP06241 537 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TRIM49P0CI25 452 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TRIM49CP0CI26 452 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 VDRP11473 427 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ATP6V1B1P15313 513 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CD19P15391 556 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 NAT1P18440 290 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 RGS7P49802 495 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 HNRNPFP52597 415 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ART1P52961 327 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 AQP5P55064 265 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 MAZP56270 477 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ATP6V0D1P61421 351 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SLC25A3Q00325 362 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 MC2RQ01718 297 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 BST1Q10588 318 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CHAF1BQ13112 559 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ART3Q13508 389 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TUBB3Q13509 450 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 NFATC4Q14934 902 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 KCTD21Q4G0X4 260 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CBWD6Q4V339 395 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TEX44Q53QW1 395 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CBWD3Q5JTY5 395 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CBWD5Q5RIA9 395 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SNAP47Q5SQN1 464 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 LGSNQ5TDP6 509 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 IRAK1BP1Q5VVH5 260 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CPZQ66K79 652 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PPP1R2P3Q6NXS1 205 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PMF1Q6P1K2 205 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 C22orf39Q6P5X5 142 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 OGFOD3Q6PK18 319 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 LCLAT1Q6UWP7 414 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 C6orf15Q6UXA7 325 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 LINGO4Q6UY18 593 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 GSTA5Q7RTV2 222 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 GPR141Q7Z602 305 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SLC47A2Q86VL8 602 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CPNE8Q86YQ8 564 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CHERPQ8IWX8 916 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PPIL6Q8IXY8 311 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SLC25A41Q8N5S1 370 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ATP6V0D2Q8N8Y2 350 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PCYOX1LQ8NBM8 494 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 OR52K2Q8NGK3 314 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 UBA3Q8TBC4 463 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TBC1D15Q8TC07 691 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 EPS8L1Q8TE68 723 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CXorf40AQ8TE69 158 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 CLEC4CQ8WTT0 213 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 PTCD2Q8WV60 388 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SLC35F5Q8WV83 523 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SREK1Q8WXA9 508 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SHC3Q92529 594 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SEMA4DQ92854 862 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 RAB7BQ96AH8 199 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 AHCYL2Q96HN2 611 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 BTBD6Q96KE9 485 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 HSFY1Q96LI6 401 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 NSMCE3Q96MG7 304 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 ZNF641Q96N77 438 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 FAM111AQ96PZ2 611 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 SRPK1Q96SB4 655 aaKnown RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 HERPUD2Q9BSE4 406 aa6.32□□□□□ -1.4
HDAC6-210ENST00000441703 C2orf49Q9BVC5 232 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-210ENST00000441703 TRIM62Q9BVG3 475 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms