RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ABI2Q9NYB9 513 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 MKLN1Q9UL63 735 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 WBP11Q9Y2W2 641 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 PCDHGB6Q9Y5F9 930 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 MAU2Q9Y6X3 613 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 M0QZQ0 153 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CXCR6O00574 342 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 FAM20BO75063 409 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PGLSO95336 258 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 MLYCDO95822 493 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RPLP2P05387 115 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 LCKP06239 509 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 EFNA1P20827 205 aaPredicted RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 PRDX3P30048 256 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 CCR1P32246 355 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 DDOSTP39656 456 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PPP3CCP48454 512 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ARSDP51689 593 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 NRG1Q02297 640 aaPredicted RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 PCSK7Q16549 785 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 DDR2Q16832 855 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 GALNT12Q8IXK2 581 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 NLGN4XQ8N0W4 816 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RTL3Q8N8U3 475 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 STAG3L4Q8TBR4 150 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SUN5Q8TC36 379 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 FCGR1BQ92637 280 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SIGLEC11Q96RL6 698 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 APOL4Q9BPW4 351 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CDADC1Q9BWV3 514 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 C1QTNF3Q9BXJ4 246 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 REXO4Q9GZR2 422 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 SIK2Q9H0K1 926 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SLA2Q9H6Q3 261 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ITM2CQ9NQX7 267 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 DCAF13Q9NV06 445 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 AASSQ9UDR5 926 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ZNF225Q9UK10 706 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 GRIP1Q9Y3R0 1128 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PKP3Q9Y446 797 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PCDHB7Q9Y5E2 793 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ELOVL7A1L3X0 281 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 MROH6A6NGR9 719 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 WASH4PA8MWX3 477 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 DSCR3O14972 297 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 DFNA5O60443 496 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PAGE1O75459 146 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CRYZL1O95825 349 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 EOMESO95936 686 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RETP07949 1114 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SERPINF2P08697 491 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 DBTP11182 482 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 IL1RNP18510 177 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 ITGB8P26012 769 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ETV6P41212 452 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 C19orf57Q0VDD7 668 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SIM2Q14190 667 aaPredicted RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 PON2Q15165 354 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 FAM171A1Q5VUB5 890 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 FAM171BQ6P995 826 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SHQ1Q6PI26 577 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 ANKRD33Q7Z3H0 272 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 GALNT5Q7Z7M9 940 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CYP4Z1Q86W10 505 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 METTL23Q86XA0 190 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SCN4BQ8IWT1 228 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CHPFQ8IZ52 775 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ATAD1Q8NBU5 361 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 OR10A6Q8NH74 314 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 HCAR2Q8TDS4 363 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 POP5Q969H6 163 aaKnown RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 ST6GAL2Q96JF0 529 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 SUSD3Q96L08 255 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CASD1Q96PB1 797 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 FAM193BQ96PV7 902 aaPredicted RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 ACOX2Q99424 681 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PKMYT1Q99640 499 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RHNO1Q9BSD3 238 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CLPBQ9H078 707 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 NUAK2Q9H093 628 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 GABARAPL1Q9H0R8 117 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RIBC2Q9H4K1 309 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 EHD3Q9NZN3 535 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 VAPAQ9P0L0 249 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RAPGEFL1Q9UHV5 662 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 RNF112Q9ULX5 631 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 CAB39Q9Y376 341 aaPredicted RBP11.63□□□□□ -0.55
LTBR-203ENST00000441074 GMPPBQ9Y5P6 360 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 PEX16Q9Y5Y5 336 aa11.63□□□□□ -0.55
LTBR-203ENST00000441074 ANKRD12Q6UB98 2062 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 A0A1W2PQ67 120 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 LOC110117498-PIK3R3F6TDL0 507 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 STX16O14662 325 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 SLC2A3P11169 496 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms