RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SOX8P57073 446 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 OASLQ15646 514 aaKnown RBP19.96■□□□□ 0.79
CPNE1-219ENST00000440240 AARS2Q5JTZ9 985 aaKnown RBP19.96■□□□□ 0.79
CPNE1-219ENST00000440240 IGFL3Q6UXB1 125 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 IQCKQ8N0W5 287 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 RNF10Q8N5U6 811 aaKnown RBP19.96■□□□□ 0.79
CPNE1-219ENST00000440240 ZNF778Q96MU6 729 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 RBSNQ9H1K0 784 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 ATP13A2Q9NQ11 1180 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 CASS4Q9NQ75 786 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 RAB6BQ9NRW1 208 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 INTS7Q9NVH2 962 aaKnown RBP19.96■□□□□ 0.79
CPNE1-219ENST00000440240 B3GNT3Q9Y2A9 372 aa19.96■□□□□ 0.79
CPNE1-219ENST00000440240 SHANK1Q9Y566 2161 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 TEX15Q9BXT5 2789 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 S1PR4O95977 384 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 CTSBP07858 339 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 PIM1P11309 404 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-219ENST00000440240 PEBP1P30086 187 aaKnown RBP19.95■□□□□ 0.78
CPNE1-219ENST00000440240 PKLRP30613 574 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 GRIA1P42261 906 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 CYP2A13Q16696 494 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 PLEKHN1Q494U1 663 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-219ENST00000440240 SEL1L2Q5TEA6 688 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 TTC23LQ6PF05 361 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 UNC5DQ6UXZ4 953 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 ZNF534Q76KX8 674 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 TMEM139Q8IV31 216 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 MCATQ8IVS2 390 aaKnown RBP19.95■□□□□ 0.78
CPNE1-219ENST00000440240 DCUN1D3Q8IWE4 304 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 CFAP61Q8NHU2 1237 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 TM9SF4Q92544 642 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-219ENST00000440240 PLEKHB1Q9UF11 243 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-219ENST00000440240 TCAF1Q9Y4C2 921 aa19.95■□□□□ 0.78
CPNE1-219ENST00000440240 SLCO2B1O94956 709 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 APRTP07741 180 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 ATXN8OSP0DMR3 200 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 MAGP20916 626 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 TTPAP49638 278 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 SLC9A5Q14940 896 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 EIF2S3LQ2VIR3 472 aaKnown RBP19.94■□□□□ 0.78
CPNE1-219ENST00000440240 PRR30Q53SZ7 412 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-219ENST00000440240 ZC3H12BQ5HYM0 836 aaKnown RBP19.94■□□□□ 0.78
CPNE1-219ENST00000440240 VRK3Q8IV63 474 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 LINC01555Q8NAE3 123 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 PPHLN1Q8NEY8 458 aaKnown RBP19.94■□□□□ 0.78
CPNE1-219ENST00000440240 GSDMBQ8TAX9 411 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 DESI2Q9BSY9 194 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 MENTQ9BUN1 341 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 ZNF552Q9H707 407 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-219ENST00000440240 SLC39A10Q9ULF5 831 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 UNC79Q9P2D8 2635 aa19.94■□□□□ 0.78
CPNE1-219ENST00000440240 A0A1B0GX78 115 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 PRMT5O14744 637 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-219ENST00000440240 KPNA5O15131 536 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 CNOT3O75175 753 aaKnown RBP19.93■□□□□ 0.78
CPNE1-219ENST00000440240 SEMA7AO75326 666 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 FKBP9O95302 570 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 DDAH2O95865 285 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 ONECUT2O95948 504 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 ALBP02768 609 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 UMODP07911 640 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 AOAHP28039 575 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 TMED2Q15363 201 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 SF1Q15637 639 aaKnown RBP19.93■□□□□ 0.78
CPNE1-219ENST00000440240 PCID2Q5JVF3 399 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 YOD1Q5VVQ6 348 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-219ENST00000440240 TTLL10Q6ZVT0 673 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 OVCH1Q7RTY7 1134 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 PPP1R32Q7Z5V6 425 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 SLC13A5Q86YT5 568 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-219ENST00000440240 FAM20CQ8IXL6 584 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 ZADH2Q8N4Q0 377 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 CCDC89Q8N998 374 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 OR2L8Q8NGY9 312 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 FKBP10Q96AY3 582 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 SNRNP40Q96DI7 357 aaKnown RBP19.93■□□□□ 0.78
CPNE1-219ENST00000440240 RAB11FIP5Q9BXF6 653 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 CATSPERZQ9NTU4 200 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 PAK5Q9P286 719 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 KLHL20Q9Y2M5 609 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 MRFAP1Q9Y605 127 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 CAPN6Q9Y6Q1 641 aa19.93■□□□□ 0.78
CPNE1-219ENST00000440240 FER1L5A0AVI2 2057 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 A0A0U1RQJ8 604 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 IQCF5A8MTL0 148 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 AGPSO00116 658 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 MMP11P24347 488 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 GCGRP47871 477 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 AIMP2Q13155 320 aaKnown RBP19.92■□□□□ 0.78
CPNE1-219ENST00000440240 MRPL49Q13405 166 aaKnown RBP19.92■□□□□ 0.78
CPNE1-219ENST00000440240 GRB7Q14451 532 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 SEMA3AQ14563 771 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 GRM7Q14831 915 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 TCTE1Q5JU00 501 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 PTRHD1Q6GMV3 140 aaKnown RBP19.92■□□□□ 0.78
CPNE1-219ENST00000440240 FIGLAQ6QHK4 219 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 C2orf73Q8N5S3 287 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-219ENST00000440240 PRR7Q8TB68 274 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms