RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 JUNDP17535 347 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 MSH3P20585 1137 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 AK4P27144 223 aaPredicted RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 HOXA6P31267 233 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 CSNK1DP48730 415 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 STC1P52823 247 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PLK1P53350 603 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PKNOX1P55347 436 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SESN3P58005 492 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 RACK1P63244 317 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TUBA4AP68366 448 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TXNL4AP83876 142 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 DAB2P98082 770 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 MPP1Q00013 466 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 MAP7Q14244 749 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PUM1Q14671 1186 aaKnown RBP eCLIP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TRIP6Q15654 476 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 FXNQ16595 210 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF284Q2VY69 593 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 LIN52Q52LA3 116 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SETMARQ53H47 684 aaPredicted RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 MTX3Q5HYI7 312 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SIRPB2Q5JXA9 342 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 INTS11Q5TA45 600 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 LYPLAL1Q5VWZ2 237 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 LRRC66Q68CR7 880 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 ERAP2Q6P179 960 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 UGT2A3Q6UWM9 527 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 DET1Q7L5Y6 550 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 ANKFN1Q8N957 763 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 DNAJB8Q8NHS0 232 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 STAG3L4Q8TBR4 150 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 DTX3LQ8TDB6 740 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PATE1Q8WXA2 126 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 JPH3Q8WXH2 748 aaPredicted RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 GFM2Q969S9 779 aaKnown RBP4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SLC45A3Q96JT2 553 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TTC1Q99614 292 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SH3GL3Q99963 347 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 OSBPL11Q9BXB4 747 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TRIM54Q9BYV2 358 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 ABCG4Q9H172 646 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 OSGEPL1Q9H4B0 414 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 CATSPERZQ9NTU4 200 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 PLEKHM1Q9Y4G2 1056 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 TRAF6Q9Y4K3 522 aa4.65□□□□□ -1.66
EDEM3-203ENST00000439962 SCN8AQ9UQD0 1980 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 FAM208BQ5VWN6 2430 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 TMEM202A6NGA9 273 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 B4DGG1 531 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 EIF3FO00303 357 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 CD3EAPO15446 510 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 PHGDHO43175 533 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 HNRNPRO43390 633 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 BAG2O95816 211 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 GPIP06744 558 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 BMP2P12643 396 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 CTSEP14091 401 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF37AP17032 561 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 HNRNPA2B1P22626 353 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 RPS3P23396 243 aaKnown RBP eCLIP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ITGB7P26010 798 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 PBLDP30039 288 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 AKT2P31751 481 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 HNF1BP35680 557 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ARRB1P49407 418 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 TTPAP49638 278 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF140P52738 457 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 PSME3P61289 254 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 RPS21P63220 83 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 CTBP1Q13363 440 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 FASTKQ14296 549 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 IRF4Q15306 451 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 AMZ1Q400G9 498 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 MMEL1Q495T6 779 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 PDCD4Q53EL6 469 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 SNAP47Q5SQN1 464 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 LCN8Q6JVE9 175 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 SLC23A3Q6PIS1 610 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 CERS6Q6ZMG9 384 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ISCA2Q86U28 154 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 HPS6Q86YV9 775 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 DENND6AQ8IWF6 608 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 MFSD2AQ8NA29 543 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 NETO1Q8TDF5 533 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 RCN3Q96D15 328 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 PDXPQ96GD0 296 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 DCUN1D1Q96GG9 259 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 CLPTM1LQ96KA5 538 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 BMFQ96LC9 184 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF597Q96LX8 424 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 MAGEB10Q96LZ2 347 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 DCBLD2Q96PD2 775 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 ELF4Q99607 663 aaPredicted RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 GPATCH1Q9BRR8 931 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 HAUS8Q9BT25 410 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 YTHDF1Q9BYJ9 559 aaKnown RBP4.65□□□□□ -1.67
EDEM3-203ENST00000439962 NUF2Q9BZD4 464 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 CAPN10Q9HC96 672 aa4.65□□□□□ -1.67
EDEM3-203ENST00000439962 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms