RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 NRTNQ99748 197 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 OLFM1Q99784 485 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 RHOXF2Q9BQY4 288 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 DPH1Q9BZG8 443 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 POPDC3Q9HBV1 291 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 SYTL2Q9HCH5 934 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 NINJ2Q9NZG7 142 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 BTRCQ9Y297 605 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 A0A087WV48 116 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 A0A0J9YY10 115 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 ISM1B1AKI9 464 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 MSL3P1P0C860 447 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 ERGP11308 486 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 FGF5P12034 268 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SPRP35270 261 aaPredicted RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 TAS2R39P59534 338 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 TUBB4BP68371 445 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SH3BP2P78314 561 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 FOXM1Q08050 763 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SLMAPQ14BN4 828 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 LRRC69Q6ZNQ3 347 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 UBE2R2Q712K3 238 aaPredicted RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 PIWIL4Q7Z3Z4 852 aaKnown RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 NKAPQ8N5F7 415 aaKnown RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 PPM1NQ8N819 430 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 EIF1ADQ8N9N8 165 aaKnown RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 OR8K5Q8NH50 307 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 DENND1AQ8TEH3 1009 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 ANKRD7Q92527 254 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 LINGO1Q96FE5 620 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 PDLIM5Q96HC4 596 aaKnown RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 IL17FQ96PD4 163 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 TRAPPC9Q96Q05 1148 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 OR6C1Q96RD1 312 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 GPR22Q99680 433 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SLC12A9Q9BXP2 914 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 FUT8Q9BYC5 575 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 CHRNA10Q9GZZ6 450 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 CDC42EP4Q9H3Q1 356 aaKnown RBP11.42□□□□□ -0.58
HSPG2-206ENST00000439717 PDE7BQ9NP56 450 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SOHLH2Q9NX45 425 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 FOXJ2Q9P0K8 574 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 B3GALT1Q9Y5Z6 326 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 KIF26BQ2KJY2 2108 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 ACACBO00763 2458 aa11.42□□□□□ -0.58
HSPG2-206ENST00000439717 SRRM3A6NNA2 597 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 STMND1H3BQB6 276 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PRICKLE3O43900 615 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PIAS1O75925 651 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 TSPAN12O95859 305 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 EBLN1P0CF75 366 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 FOLR1P15328 257 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 ST6GAL1P15907 406 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 ZNF37AP17032 561 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 CYP2A7P20853 494 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 SAT1P21673 171 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 OAS2P29728 719 aaKnown RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PEBP1P30086 187 aaKnown RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 SLC12A2P55011 1212 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 TUBB3Q13509 450 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PPP1R3BQ86XI6 285 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 LMNTD1Q8N9Z9 388 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 LRRN4CLQ8ND94 238 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 MCOLN3Q8TDD5 553 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 KCNE4Q8WWG9 221 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PMEPA1Q969W9 287 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 TSPAN17Q96FV3 270 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 TCTN2Q96GX1 697 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PPM1MQ96MI6 270 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 FCRL4Q96PJ5 515 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 CYTH2Q99418 400 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PKP4Q99569 1192 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 CTRCQ99895 268 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 ACSS3Q9H6R3 686 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 FANCEQ9HB96 536 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 PARVBQ9HBI1 364 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 APMAPQ9HDC9 416 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 INTS7Q9NVH2 962 aaKnown RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 CIDEBQ9UHD4 219 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 RARRES3Q9UL19 164 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 NFU1Q9UMS0 254 aa11.41□□□□□ -0.58
HSPG2-206ENST00000439717 MTO1Q9Y2Z2 717 aaKnown RBP11.41□□□□□ -0.58
HSPG2-206ENST00000439717 DMXL2Q8TDJ6 3036 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 ENO2P09104 434 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 LIPCP11150 499 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 PNLIPRP1P54315 467 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 USP10Q14694 798 aaKnown RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 KCNAB1Q14722 419 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 NAA25Q14CX7 972 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 SF1Q15637 639 aaKnown RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 TEX35Q5T0J7 233 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 FBXO38Q6PIJ6 1188 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 TMEM207Q6UWW9 146 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 DTX1Q86Y01 620 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 C2orf73Q8N5S3 287 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms